Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4873 | 14842;14843;14844 | chr2:178735829;178735828;178735827 | chr2:179600556;179600555;179600554 |
N2AB | 4556 | 13891;13892;13893 | chr2:178735829;178735828;178735827 | chr2:179600556;179600555;179600554 |
N2A | 3629 | 11110;11111;11112 | chr2:178735829;178735828;178735827 | chr2:179600556;179600555;179600554 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.704 | N | 0.303 | 0.262 | 0.304108284078 | gnomAD-4.0.0 | 1.59142E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85816E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.7601 | likely_pathogenic | 0.8296 | pathogenic | -0.687 | Destabilizing | 0.079 | N | 0.354 | neutral | None | None | None | None | I |
F/C | 0.7005 | likely_pathogenic | 0.7547 | pathogenic | -0.275 | Destabilizing | 0.999 | D | 0.575 | neutral | N | 0.51177561 | None | None | I |
F/D | 0.9405 | likely_pathogenic | 0.9543 | pathogenic | 0.638 | Stabilizing | 0.991 | D | 0.561 | neutral | None | None | None | None | I |
F/E | 0.9613 | likely_pathogenic | 0.9662 | pathogenic | 0.601 | Stabilizing | 0.991 | D | 0.533 | neutral | None | None | None | None | I |
F/G | 0.9334 | likely_pathogenic | 0.949 | pathogenic | -0.836 | Destabilizing | 0.939 | D | 0.545 | neutral | None | None | None | None | I |
F/H | 0.7775 | likely_pathogenic | 0.7894 | pathogenic | 0.333 | Stabilizing | 0.999 | D | 0.535 | neutral | None | None | None | None | I |
F/I | 0.622 | likely_pathogenic | 0.6724 | pathogenic | -0.33 | Destabilizing | 0.704 | D | 0.38 | neutral | N | 0.450443854 | None | None | I |
F/K | 0.9676 | likely_pathogenic | 0.9713 | pathogenic | -0.01 | Destabilizing | 0.991 | D | 0.543 | neutral | None | None | None | None | I |
F/L | 0.9615 | likely_pathogenic | 0.968 | pathogenic | -0.33 | Destabilizing | 0.704 | D | 0.303 | neutral | N | 0.406339391 | None | None | I |
F/M | 0.8414 | likely_pathogenic | 0.8632 | pathogenic | -0.374 | Destabilizing | 0.991 | D | 0.427 | neutral | None | None | None | None | I |
F/N | 0.8509 | likely_pathogenic | 0.8793 | pathogenic | -0.017 | Destabilizing | 0.997 | D | 0.563 | neutral | None | None | None | None | I |
F/P | 0.9973 | likely_pathogenic | 0.998 | pathogenic | -0.43 | Destabilizing | 0.991 | D | 0.56 | neutral | None | None | None | None | I |
F/Q | 0.9367 | likely_pathogenic | 0.9457 | pathogenic | -0.045 | Destabilizing | 0.997 | D | 0.555 | neutral | None | None | None | None | I |
F/R | 0.9179 | likely_pathogenic | 0.9282 | pathogenic | 0.343 | Stabilizing | 0.991 | D | 0.565 | neutral | None | None | None | None | I |
F/S | 0.7191 | likely_pathogenic | 0.796 | pathogenic | -0.578 | Destabilizing | 0.852 | D | 0.547 | neutral | N | 0.475279692 | None | None | I |
F/T | 0.8571 | likely_pathogenic | 0.893 | pathogenic | -0.525 | Destabilizing | 0.939 | D | 0.549 | neutral | None | None | None | None | I |
F/V | 0.5619 | ambiguous | 0.6202 | pathogenic | -0.43 | Destabilizing | 0.061 | N | 0.313 | neutral | N | 0.428213776 | None | None | I |
F/W | 0.6647 | likely_pathogenic | 0.6658 | pathogenic | -0.357 | Destabilizing | 0.999 | D | 0.457 | neutral | None | None | None | None | I |
F/Y | 0.2124 | likely_benign | 0.1907 | benign | -0.29 | Destabilizing | 0.986 | D | 0.39 | neutral | N | 0.398330804 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.