Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4880 | 14863;14864;14865 | chr2:178735808;178735807;178735806 | chr2:179600535;179600534;179600533 |
N2AB | 4563 | 13912;13913;13914 | chr2:178735808;178735807;178735806 | chr2:179600535;179600534;179600533 |
N2A | 3636 | 11131;11132;11133 | chr2:178735808;178735807;178735806 | chr2:179600535;179600534;179600533 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs373683445 | 0.056 | 0.669 | N | 0.609 | 0.372 | None | gnomAD-2.1.1 | 4.29E-05 | None | None | None | None | I | None | 4.96032E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
A/V | rs373683445 | 0.056 | 0.669 | N | 0.609 | 0.372 | None | gnomAD-3.1.2 | 1.31427E-04 | None | None | None | None | I | None | 4.58494E-04 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/V | rs373683445 | 0.056 | 0.669 | N | 0.609 | 0.372 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
A/V | rs373683445 | 0.056 | 0.669 | N | 0.609 | 0.372 | None | gnomAD-4.0.0 | 2.54071E-05 | None | None | None | None | I | None | 4.79744E-04 | 3.33344E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.80307E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7833 | likely_pathogenic | 0.7054 | pathogenic | -1.013 | Destabilizing | 0.998 | D | 0.673 | neutral | None | None | None | None | I |
A/D | 0.8312 | likely_pathogenic | 0.8216 | pathogenic | -1.533 | Destabilizing | 0.949 | D | 0.766 | deleterious | None | None | None | None | I |
A/E | 0.8267 | likely_pathogenic | 0.8182 | pathogenic | -1.459 | Destabilizing | 0.801 | D | 0.73 | prob.delet. | D | 0.704471673 | None | None | I |
A/F | 0.8967 | likely_pathogenic | 0.8477 | pathogenic | -0.868 | Destabilizing | 0.949 | D | 0.77 | deleterious | None | None | None | None | I |
A/G | 0.1687 | likely_benign | 0.1547 | benign | -1.384 | Destabilizing | 0.669 | D | 0.616 | neutral | N | 0.521381682 | None | None | I |
A/H | 0.9511 | likely_pathogenic | 0.942 | pathogenic | -1.692 | Destabilizing | 0.998 | D | 0.727 | prob.delet. | None | None | None | None | I |
A/I | 0.8204 | likely_pathogenic | 0.7313 | pathogenic | -0.058 | Destabilizing | 0.728 | D | 0.742 | deleterious | None | None | None | None | I |
A/K | 0.9582 | likely_pathogenic | 0.9553 | pathogenic | -1.195 | Destabilizing | 0.842 | D | 0.721 | prob.delet. | None | None | None | None | I |
A/L | 0.7334 | likely_pathogenic | 0.6483 | pathogenic | -0.058 | Destabilizing | 0.525 | D | 0.632 | neutral | None | None | None | None | I |
A/M | 0.6752 | likely_pathogenic | 0.5724 | pathogenic | -0.111 | Destabilizing | 0.525 | D | 0.565 | neutral | None | None | None | None | I |
A/N | 0.8107 | likely_pathogenic | 0.7669 | pathogenic | -1.114 | Destabilizing | 0.949 | D | 0.772 | deleterious | None | None | None | None | I |
A/P | 0.9752 | likely_pathogenic | 0.9768 | pathogenic | -0.328 | Destabilizing | 0.966 | D | 0.765 | deleterious | D | 0.704928236 | None | None | I |
A/Q | 0.8823 | likely_pathogenic | 0.8708 | pathogenic | -1.113 | Destabilizing | 0.974 | D | 0.753 | deleterious | None | None | None | None | I |
A/R | 0.922 | likely_pathogenic | 0.9253 | pathogenic | -1.072 | Destabilizing | 0.949 | D | 0.761 | deleterious | None | None | None | None | I |
A/S | 0.1607 | likely_benign | 0.145 | benign | -1.557 | Destabilizing | 0.051 | N | 0.267 | neutral | N | 0.521893759 | None | None | I |
A/T | 0.202 | likely_benign | 0.1485 | benign | -1.365 | Destabilizing | 0.022 | N | 0.173 | neutral | N | 0.520384463 | None | None | I |
A/V | 0.4409 | ambiguous | 0.3601 | ambiguous | -0.328 | Destabilizing | 0.669 | D | 0.609 | neutral | N | 0.51015592 | None | None | I |
A/W | 0.981 | likely_pathogenic | 0.975 | pathogenic | -1.41 | Destabilizing | 0.998 | D | 0.779 | deleterious | None | None | None | None | I |
A/Y | 0.9361 | likely_pathogenic | 0.9172 | pathogenic | -0.916 | Destabilizing | 0.991 | D | 0.744 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.