Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4884 | 14875;14876;14877 | chr2:178735796;178735795;178735794 | chr2:179600523;179600522;179600521 |
N2AB | 4567 | 13924;13925;13926 | chr2:178735796;178735795;178735794 | chr2:179600523;179600522;179600521 |
N2A | 3640 | 11143;11144;11145 | chr2:178735796;178735795;178735794 | chr2:179600523;179600522;179600521 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | None | N | 0.345 | 0.092 | 0.156986980423 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7445 | likely_pathogenic | 0.6353 | pathogenic | -2.43 | Highly Destabilizing | 0.072 | N | 0.641 | neutral | None | None | None | None | N |
I/C | 0.864 | likely_pathogenic | 0.8059 | pathogenic | -1.692 | Destabilizing | 0.909 | D | 0.72 | prob.delet. | None | None | None | None | N |
I/D | 0.9793 | likely_pathogenic | 0.9613 | pathogenic | -2.404 | Highly Destabilizing | 0.726 | D | 0.795 | deleterious | None | None | None | None | N |
I/E | 0.9593 | likely_pathogenic | 0.9333 | pathogenic | -2.209 | Highly Destabilizing | 0.726 | D | 0.782 | deleterious | None | None | None | None | N |
I/F | 0.5439 | ambiguous | 0.4277 | ambiguous | -1.379 | Destabilizing | 0.497 | N | 0.587 | neutral | D | 0.619400411 | None | None | N |
I/G | 0.9287 | likely_pathogenic | 0.8777 | pathogenic | -2.929 | Highly Destabilizing | 0.726 | D | 0.768 | deleterious | None | None | None | None | N |
I/H | 0.9468 | likely_pathogenic | 0.9098 | pathogenic | -2.283 | Highly Destabilizing | 0.968 | D | 0.793 | deleterious | None | None | None | None | N |
I/K | 0.922 | likely_pathogenic | 0.8812 | pathogenic | -1.677 | Destabilizing | 0.726 | D | 0.781 | deleterious | None | None | None | None | N |
I/L | 0.2118 | likely_benign | 0.1573 | benign | -1.002 | Destabilizing | 0.025 | N | 0.465 | neutral | N | 0.52081098 | None | None | N |
I/M | 0.2626 | likely_benign | 0.2052 | benign | -1.058 | Destabilizing | 0.497 | N | 0.621 | neutral | D | 0.620411052 | None | None | N |
I/N | 0.7911 | likely_pathogenic | 0.7161 | pathogenic | -1.892 | Destabilizing | 0.859 | D | 0.801 | deleterious | D | 0.621055801 | None | None | N |
I/P | 0.9151 | likely_pathogenic | 0.8788 | pathogenic | -1.458 | Destabilizing | 0.89 | D | 0.801 | deleterious | None | None | None | None | N |
I/Q | 0.9324 | likely_pathogenic | 0.8914 | pathogenic | -1.802 | Destabilizing | 0.89 | D | 0.801 | deleterious | None | None | None | None | N |
I/R | 0.8838 | likely_pathogenic | 0.8338 | pathogenic | -1.4 | Destabilizing | 0.726 | D | 0.801 | deleterious | None | None | None | None | N |
I/S | 0.7685 | likely_pathogenic | 0.682 | pathogenic | -2.61 | Highly Destabilizing | 0.497 | N | 0.73 | prob.delet. | D | 0.620528145 | None | None | N |
I/T | 0.616 | likely_pathogenic | 0.5285 | ambiguous | -2.282 | Highly Destabilizing | 0.124 | N | 0.64 | neutral | D | 0.579033094 | None | None | N |
I/V | 0.0792 | likely_benign | 0.0666 | benign | -1.458 | Destabilizing | None | N | 0.345 | neutral | N | 0.350329813 | None | None | N |
I/W | 0.979 | likely_pathogenic | 0.9644 | pathogenic | -1.679 | Destabilizing | 0.968 | D | 0.783 | deleterious | None | None | None | None | N |
I/Y | 0.8945 | likely_pathogenic | 0.8345 | pathogenic | -1.421 | Destabilizing | 0.726 | D | 0.72 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.