Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4889 | 14890;14891;14892 | chr2:178735781;178735780;178735779 | chr2:179600508;179600507;179600506 |
N2AB | 4572 | 13939;13940;13941 | chr2:178735781;178735780;178735779 | chr2:179600508;179600507;179600506 |
N2A | 3645 | 11158;11159;11160 | chr2:178735781;178735780;178735779 | chr2:179600508;179600507;179600506 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs766842583 | -0.694 | None | N | 0.154 | 0.143 | 0.0666544352282 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
H/R | rs766842583 | -0.694 | None | N | 0.154 | 0.143 | 0.0666544352282 | gnomAD-4.0.0 | 2.73702E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99465E-07 | 3.47818E-05 | 0 |
H/Y | None | None | 0.106 | N | 0.454 | 0.19 | 0.201204373187 | gnomAD-4.0.0 | 1.59151E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2341 | likely_benign | 0.1794 | benign | 0.327 | Stabilizing | 0.007 | N | 0.339 | neutral | None | None | None | None | N |
H/C | 0.1111 | likely_benign | 0.088 | benign | 0.766 | Stabilizing | 0.864 | D | 0.525 | neutral | None | None | None | None | N |
H/D | 0.2321 | likely_benign | 0.2004 | benign | -0.12 | Destabilizing | 0.055 | N | 0.475 | neutral | N | 0.430596323 | None | None | N |
H/E | 0.2837 | likely_benign | 0.2284 | benign | -0.08 | Destabilizing | 0.016 | N | 0.349 | neutral | None | None | None | None | N |
H/F | 0.3068 | likely_benign | 0.2323 | benign | 1.15 | Stabilizing | 0.356 | N | 0.555 | neutral | None | None | None | None | N |
H/G | 0.2577 | likely_benign | 0.2066 | benign | 0.03 | Stabilizing | 0.031 | N | 0.374 | neutral | None | None | None | None | N |
H/I | 0.2433 | likely_benign | 0.1844 | benign | 1.094 | Stabilizing | 0.356 | N | 0.575 | neutral | None | None | None | None | N |
H/K | 0.1864 | likely_benign | 0.1572 | benign | 0.319 | Stabilizing | 0.016 | N | 0.399 | neutral | None | None | None | None | N |
H/L | 0.1125 | likely_benign | 0.0957 | benign | 1.094 | Stabilizing | 0.055 | N | 0.485 | neutral | N | 0.456861703 | None | None | N |
H/M | 0.4359 | ambiguous | 0.347 | ambiguous | 0.769 | Stabilizing | 0.628 | D | 0.524 | neutral | None | None | None | None | N |
H/N | 0.1108 | likely_benign | 0.0988 | benign | 0.22 | Stabilizing | 0.024 | N | 0.375 | neutral | N | 0.438083607 | None | None | N |
H/P | 0.4001 | ambiguous | 0.4205 | ambiguous | 0.863 | Stabilizing | 0.106 | N | 0.591 | neutral | N | 0.506351438 | None | None | N |
H/Q | 0.1411 | likely_benign | 0.1144 | benign | 0.35 | Stabilizing | 0.055 | N | 0.449 | neutral | N | 0.418841012 | None | None | N |
H/R | 0.0695 | likely_benign | 0.0633 | benign | -0.322 | Destabilizing | None | N | 0.154 | neutral | N | 0.381555337 | None | None | N |
H/S | 0.183 | likely_benign | 0.1522 | benign | 0.361 | Stabilizing | None | N | 0.253 | neutral | None | None | None | None | N |
H/T | 0.2097 | likely_benign | 0.1613 | benign | 0.505 | Stabilizing | 0.016 | N | 0.4 | neutral | None | None | None | None | N |
H/V | 0.1995 | likely_benign | 0.1572 | benign | 0.863 | Stabilizing | 0.072 | N | 0.567 | neutral | None | None | None | None | N |
H/W | 0.3018 | likely_benign | 0.2437 | benign | 1.169 | Stabilizing | 0.864 | D | 0.532 | neutral | None | None | None | None | N |
H/Y | 0.0897 | likely_benign | 0.0793 | benign | 1.387 | Stabilizing | 0.106 | N | 0.454 | neutral | N | 0.35705943 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.