Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4891 | 14896;14897;14898 | chr2:178735775;178735774;178735773 | chr2:179600502;179600501;179600500 |
N2AB | 4574 | 13945;13946;13947 | chr2:178735775;178735774;178735773 | chr2:179600502;179600501;179600500 |
N2A | 3647 | 11164;11165;11166 | chr2:178735775;178735774;178735773 | chr2:179600502;179600501;179600500 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs1304712343 | None | 0.267 | N | 0.173 | 0.072 | 0.419835214384 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/L | rs1304712343 | None | 0.267 | N | 0.173 | 0.072 | 0.419835214384 | gnomAD-4.0.0 | 6.56996E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46972E-05 | 0 | 0 |
I/S | None | None | 0.136 | N | 0.183 | 0.154 | 0.51081628273 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4803 | ambiguous | 0.392 | ambiguous | -1.13 | Destabilizing | 0.525 | D | 0.275 | neutral | None | None | None | None | N |
I/C | 0.7197 | likely_pathogenic | 0.6307 | pathogenic | -0.707 | Destabilizing | 0.998 | D | 0.279 | neutral | None | None | None | None | N |
I/D | 0.767 | likely_pathogenic | 0.688 | pathogenic | -0.509 | Destabilizing | 0.842 | D | 0.423 | neutral | None | None | None | None | N |
I/E | 0.547 | ambiguous | 0.4596 | ambiguous | -0.546 | Destabilizing | 0.842 | D | 0.398 | neutral | None | None | None | None | N |
I/F | 0.2092 | likely_benign | 0.1673 | benign | -0.778 | Destabilizing | 0.934 | D | 0.294 | neutral | N | 0.480711742 | None | None | N |
I/G | 0.7079 | likely_pathogenic | 0.6032 | pathogenic | -1.385 | Destabilizing | 0.842 | D | 0.369 | neutral | None | None | None | None | N |
I/H | 0.5091 | ambiguous | 0.4131 | ambiguous | -0.477 | Destabilizing | 0.998 | D | 0.316 | neutral | None | None | None | None | N |
I/K | 0.3365 | likely_benign | 0.2664 | benign | -0.723 | Destabilizing | 0.842 | D | 0.399 | neutral | None | None | None | None | N |
I/L | 0.1212 | likely_benign | 0.1032 | benign | -0.54 | Destabilizing | 0.267 | N | 0.173 | neutral | N | 0.349013657 | None | None | N |
I/M | 0.1343 | likely_benign | 0.1145 | benign | -0.474 | Destabilizing | 0.966 | D | 0.289 | neutral | N | 0.446047051 | None | None | N |
I/N | 0.3464 | ambiguous | 0.2849 | benign | -0.564 | Destabilizing | 0.934 | D | 0.409 | neutral | N | 0.473039118 | None | None | N |
I/P | 0.7997 | likely_pathogenic | 0.7712 | pathogenic | -0.704 | Destabilizing | 0.974 | D | 0.395 | neutral | None | None | None | None | N |
I/Q | 0.375 | ambiguous | 0.2972 | benign | -0.763 | Destabilizing | 0.974 | D | 0.371 | neutral | None | None | None | None | N |
I/R | 0.237 | likely_benign | 0.191 | benign | -0.092 | Destabilizing | 0.974 | D | 0.385 | neutral | None | None | None | None | N |
I/S | 0.3339 | likely_benign | 0.2797 | benign | -1.11 | Destabilizing | 0.136 | N | 0.183 | neutral | N | 0.449635113 | None | None | N |
I/T | 0.2566 | likely_benign | 0.2109 | benign | -1.036 | Destabilizing | 0.051 | N | 0.153 | neutral | N | 0.438836652 | None | None | N |
I/V | 0.0973 | likely_benign | 0.0844 | benign | -0.704 | Destabilizing | 0.005 | N | 0.138 | neutral | N | 0.426081823 | None | None | N |
I/W | 0.7368 | likely_pathogenic | 0.641 | pathogenic | -0.808 | Destabilizing | 0.998 | D | 0.367 | neutral | None | None | None | None | N |
I/Y | 0.5618 | ambiguous | 0.4777 | ambiguous | -0.587 | Destabilizing | 0.974 | D | 0.319 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.