Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4893 | 14902;14903;14904 | chr2:178735769;178735768;178735767 | chr2:179600496;179600495;179600494 |
N2AB | 4576 | 13951;13952;13953 | chr2:178735769;178735768;178735767 | chr2:179600496;179600495;179600494 |
N2A | 3649 | 11170;11171;11172 | chr2:178735769;178735768;178735767 | chr2:179600496;179600495;179600494 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs761383226 | 0.021 | None | D | 0.149 | 0.162 | 0.130388298395 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
E/D | rs761383226 | 0.021 | None | D | 0.149 | 0.162 | 0.130388298395 | gnomAD-4.0.0 | 9.549E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 8.59673E-05 | 0 |
E/K | None | None | 0.012 | N | 0.235 | 0.113 | 0.267755039894 | gnomAD-4.0.0 | 6.84258E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99468E-07 | 0 | 0 |
E/Q | None | None | None | N | 0.151 | 0.084 | 0.226586394389 | gnomAD-4.0.0 | 6.84258E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99468E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1026 | likely_benign | 0.0942 | benign | -0.735 | Destabilizing | None | N | 0.13 | neutral | N | 0.504899869 | None | None | N |
E/C | 0.7161 | likely_pathogenic | 0.6513 | pathogenic | -0.404 | Destabilizing | 0.864 | D | 0.272 | neutral | None | None | None | None | N |
E/D | 0.1488 | likely_benign | 0.1395 | benign | -0.676 | Destabilizing | None | N | 0.149 | neutral | D | 0.566677304 | None | None | N |
E/F | 0.6027 | likely_pathogenic | 0.5385 | ambiguous | -0.084 | Destabilizing | 0.356 | N | 0.304 | neutral | None | None | None | None | N |
E/G | 0.1045 | likely_benign | 0.0958 | benign | -1.058 | Destabilizing | 0.024 | N | 0.337 | neutral | N | 0.513098491 | None | None | N |
E/H | 0.3567 | ambiguous | 0.3088 | benign | -0.115 | Destabilizing | 0.214 | N | 0.296 | neutral | None | None | None | None | N |
E/I | 0.2705 | likely_benign | 0.2297 | benign | 0.134 | Stabilizing | 0.038 | N | 0.4 | neutral | None | None | None | None | N |
E/K | 0.0995 | likely_benign | 0.0835 | benign | -0.245 | Destabilizing | 0.012 | N | 0.235 | neutral | N | 0.464025891 | None | None | N |
E/L | 0.2676 | likely_benign | 0.2212 | benign | 0.134 | Stabilizing | 0.016 | N | 0.342 | neutral | None | None | None | None | N |
E/M | 0.3062 | likely_benign | 0.2656 | benign | 0.359 | Stabilizing | 0.356 | N | 0.289 | neutral | None | None | None | None | N |
E/N | 0.2039 | likely_benign | 0.1708 | benign | -0.757 | Destabilizing | 0.038 | N | 0.243 | neutral | None | None | None | None | N |
E/P | 0.2458 | likely_benign | 0.2298 | benign | -0.135 | Destabilizing | None | N | 0.228 | neutral | None | None | None | None | N |
E/Q | 0.1003 | likely_benign | 0.0905 | benign | -0.639 | Destabilizing | None | N | 0.151 | neutral | N | 0.500518501 | None | None | N |
E/R | 0.169 | likely_benign | 0.1445 | benign | 0.112 | Stabilizing | 0.038 | N | 0.275 | neutral | None | None | None | None | N |
E/S | 0.1569 | likely_benign | 0.138 | benign | -1.015 | Destabilizing | 0.003 | N | 0.159 | neutral | None | None | None | None | N |
E/T | 0.1508 | likely_benign | 0.1347 | benign | -0.742 | Destabilizing | 0.001 | N | 0.219 | neutral | None | None | None | None | N |
E/V | 0.1466 | likely_benign | 0.1286 | benign | -0.135 | Destabilizing | None | N | 0.231 | neutral | N | 0.509815767 | None | None | N |
E/W | 0.7971 | likely_pathogenic | 0.7535 | pathogenic | 0.236 | Stabilizing | 0.864 | D | 0.261 | neutral | None | None | None | None | N |
E/Y | 0.4478 | ambiguous | 0.397 | ambiguous | 0.189 | Stabilizing | 0.356 | N | 0.299 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.