Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4896 | 14911;14912;14913 | chr2:178735760;178735759;178735758 | chr2:179600487;179600486;179600485 |
N2AB | 4579 | 13960;13961;13962 | chr2:178735760;178735759;178735758 | chr2:179600487;179600486;179600485 |
N2A | 3652 | 11179;11180;11181 | chr2:178735760;178735759;178735758 | chr2:179600487;179600486;179600485 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.001 | N | 0.19 | 0.083 | 0.0806252709748 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 1.26695E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0649 | likely_benign | 0.0577 | benign | -0.438 | Destabilizing | 0.001 | N | 0.188 | neutral | N | 0.435694601 | None | None | N |
P/C | 0.4483 | ambiguous | 0.3346 | benign | -0.555 | Destabilizing | 0.909 | D | 0.578 | neutral | None | None | None | None | N |
P/D | 0.3022 | likely_benign | 0.2385 | benign | -0.581 | Destabilizing | 0.272 | N | 0.415 | neutral | None | None | None | None | N |
P/E | 0.2363 | likely_benign | 0.1925 | benign | -0.707 | Destabilizing | 0.157 | N | 0.356 | neutral | None | None | None | None | N |
P/F | 0.4167 | ambiguous | 0.3262 | benign | -0.738 | Destabilizing | 0.726 | D | 0.576 | neutral | None | None | None | None | N |
P/G | 0.2483 | likely_benign | 0.1861 | benign | -0.554 | Destabilizing | 0.157 | N | 0.421 | neutral | None | None | None | None | N |
P/H | 0.1665 | likely_benign | 0.1354 | benign | -0.204 | Destabilizing | 0.883 | D | 0.532 | neutral | N | 0.453636257 | None | None | N |
P/I | 0.2988 | likely_benign | 0.2406 | benign | -0.282 | Destabilizing | 0.567 | D | 0.564 | neutral | None | None | None | None | N |
P/K | 0.268 | likely_benign | 0.2114 | benign | -0.505 | Destabilizing | 0.157 | N | 0.405 | neutral | None | None | None | None | N |
P/L | 0.1184 | likely_benign | 0.1036 | benign | -0.282 | Destabilizing | 0.124 | N | 0.495 | neutral | N | 0.461829693 | None | None | N |
P/M | 0.2603 | likely_benign | 0.2152 | benign | -0.348 | Destabilizing | 0.909 | D | 0.533 | neutral | None | None | None | None | N |
P/N | 0.2155 | likely_benign | 0.172 | benign | -0.188 | Destabilizing | 0.396 | N | 0.48 | neutral | None | None | None | None | N |
P/Q | 0.1501 | likely_benign | 0.1281 | benign | -0.468 | Destabilizing | 0.033 | N | 0.299 | neutral | None | None | None | None | N |
P/R | 0.1833 | likely_benign | 0.1536 | benign | 0.044 | Stabilizing | 0.497 | N | 0.525 | neutral | N | 0.501054754 | None | None | N |
P/S | 0.0983 | likely_benign | 0.0814 | benign | -0.466 | Destabilizing | 0.001 | N | 0.19 | neutral | N | 0.444456554 | None | None | N |
P/T | 0.0823 | likely_benign | 0.0738 | benign | -0.501 | Destabilizing | 0.124 | N | 0.353 | neutral | N | 0.438870361 | None | None | N |
P/V | 0.1992 | likely_benign | 0.1683 | benign | -0.3 | Destabilizing | 0.157 | N | 0.489 | neutral | None | None | None | None | N |
P/W | 0.5835 | likely_pathogenic | 0.4495 | ambiguous | -0.824 | Destabilizing | 0.968 | D | 0.665 | neutral | None | None | None | None | N |
P/Y | 0.3537 | ambiguous | 0.2704 | benign | -0.527 | Destabilizing | 0.726 | D | 0.579 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.