Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4901 | 14926;14927;14928 | chr2:178735745;178735744;178735743 | chr2:179600472;179600471;179600470 |
N2AB | 4584 | 13975;13976;13977 | chr2:178735745;178735744;178735743 | chr2:179600472;179600471;179600470 |
N2A | 3657 | 11194;11195;11196 | chr2:178735745;178735744;178735743 | chr2:179600472;179600471;179600470 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs886038840 | 0.095 | None | N | 0.117 | 0.059 | 0.15556083564 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/V | rs886038840 | 0.095 | None | N | 0.117 | 0.059 | 0.15556083564 | gnomAD-4.0.0 | 4.10536E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49726E-06 | 1.15934E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2245 | likely_benign | 0.2333 | benign | -1.187 | Destabilizing | 0.116 | N | 0.369 | neutral | None | None | None | None | I |
I/C | 0.6515 | likely_pathogenic | 0.6613 | pathogenic | -0.695 | Destabilizing | 0.944 | D | 0.29 | neutral | None | None | None | None | I |
I/D | 0.708 | likely_pathogenic | 0.6997 | pathogenic | -0.556 | Destabilizing | 0.818 | D | 0.366 | neutral | None | None | None | None | I |
I/E | 0.5323 | ambiguous | 0.5287 | ambiguous | -0.617 | Destabilizing | 0.818 | D | 0.365 | neutral | None | None | None | None | I |
I/F | 0.1738 | likely_benign | 0.1796 | benign | -0.951 | Destabilizing | 0.627 | D | 0.304 | neutral | N | 0.470730168 | None | None | I |
I/G | 0.4701 | ambiguous | 0.4987 | ambiguous | -1.43 | Destabilizing | 0.563 | D | 0.368 | neutral | None | None | None | None | I |
I/H | 0.55 | ambiguous | 0.5612 | ambiguous | -0.593 | Destabilizing | 0.981 | D | 0.327 | neutral | None | None | None | None | I |
I/K | 0.3754 | ambiguous | 0.3723 | ambiguous | -0.71 | Destabilizing | 0.818 | D | 0.365 | neutral | None | None | None | None | I |
I/L | 0.1043 | likely_benign | 0.1079 | benign | -0.634 | Destabilizing | 0.018 | N | 0.299 | neutral | N | 0.445069106 | None | None | I |
I/M | 0.102 | likely_benign | 0.1027 | benign | -0.475 | Destabilizing | 0.627 | D | 0.32 | neutral | N | 0.431652641 | None | None | I |
I/N | 0.2915 | likely_benign | 0.2871 | benign | -0.424 | Destabilizing | 0.912 | D | 0.351 | neutral | N | 0.453027599 | None | None | I |
I/P | 0.5508 | ambiguous | 0.5723 | pathogenic | -0.785 | Destabilizing | 0.932 | D | 0.373 | neutral | None | None | None | None | I |
I/Q | 0.4168 | ambiguous | 0.4204 | ambiguous | -0.673 | Destabilizing | 0.932 | D | 0.343 | neutral | None | None | None | None | I |
I/R | 0.31 | likely_benign | 0.3002 | benign | -0.063 | Destabilizing | 0.818 | D | 0.346 | neutral | None | None | None | None | I |
I/S | 0.2755 | likely_benign | 0.2708 | benign | -0.974 | Destabilizing | 0.324 | N | 0.375 | neutral | N | 0.447990119 | None | None | I |
I/T | 0.2383 | likely_benign | 0.2192 | benign | -0.924 | Destabilizing | 0.324 | N | 0.353 | neutral | N | 0.448861511 | None | None | I |
I/V | 0.0588 | likely_benign | 0.0606 | benign | -0.785 | Destabilizing | None | N | 0.117 | neutral | N | 0.42067837 | None | None | I |
I/W | 0.7468 | likely_pathogenic | 0.7537 | pathogenic | -0.942 | Destabilizing | 0.981 | D | 0.406 | neutral | None | None | None | None | I |
I/Y | 0.5206 | ambiguous | 0.528 | ambiguous | -0.73 | Destabilizing | 0.818 | D | 0.322 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.