Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4902 | 14929;14930;14931 | chr2:178735742;178735741;178735740 | chr2:179600469;179600468;179600467 |
N2AB | 4585 | 13978;13979;13980 | chr2:178735742;178735741;178735740 | chr2:179600469;179600468;179600467 |
N2A | 3658 | 11197;11198;11199 | chr2:178735742;178735741;178735740 | chr2:179600469;179600468;179600467 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | rs1461011434 | None | 0.999 | D | 0.559 | 0.487 | 0.371531589858 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/H | rs1461011434 | None | 0.999 | D | 0.559 | 0.487 | 0.371531589858 | gnomAD-4.0.0 | 6.56996E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46977E-05 | 0 | 0 |
N/S | rs1208544617 | None | 0.978 | D | 0.519 | 0.401 | 0.29527378943 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/S | rs1208544617 | None | 0.978 | D | 0.519 | 0.401 | 0.29527378943 | gnomAD-4.0.0 | 2.5621E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78572E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3887 | ambiguous | 0.458 | ambiguous | -0.268 | Destabilizing | 0.967 | D | 0.571 | neutral | None | None | None | None | I |
N/C | 0.4572 | ambiguous | 0.5204 | ambiguous | 0.285 | Stabilizing | 1.0 | D | 0.616 | neutral | None | None | None | None | I |
N/D | 0.2122 | likely_benign | 0.2556 | benign | 0.298 | Stabilizing | 0.989 | D | 0.521 | neutral | D | 0.627470422 | None | None | I |
N/E | 0.572 | likely_pathogenic | 0.6337 | pathogenic | 0.283 | Stabilizing | 0.997 | D | 0.545 | neutral | None | None | None | None | I |
N/F | 0.6672 | likely_pathogenic | 0.7228 | pathogenic | -0.552 | Destabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | I |
N/G | 0.2221 | likely_benign | 0.2514 | benign | -0.463 | Destabilizing | 0.071 | N | 0.293 | neutral | None | None | None | None | I |
N/H | 0.1305 | likely_benign | 0.1525 | benign | -0.396 | Destabilizing | 0.999 | D | 0.559 | neutral | D | 0.680532133 | None | None | I |
N/I | 0.5486 | ambiguous | 0.6266 | pathogenic | 0.162 | Stabilizing | 0.999 | D | 0.603 | neutral | D | 0.782756257 | None | None | I |
N/K | 0.4223 | ambiguous | 0.4717 | ambiguous | 0.118 | Stabilizing | 0.997 | D | 0.541 | neutral | D | 0.648494355 | None | None | I |
N/L | 0.369 | ambiguous | 0.4139 | ambiguous | 0.162 | Stabilizing | 0.998 | D | 0.579 | neutral | None | None | None | None | I |
N/M | 0.5079 | ambiguous | 0.5652 | pathogenic | 0.318 | Stabilizing | 1.0 | D | 0.571 | neutral | None | None | None | None | I |
N/P | 0.734 | likely_pathogenic | 0.7763 | pathogenic | 0.046 | Stabilizing | 0.999 | D | 0.549 | neutral | None | None | None | None | I |
N/Q | 0.3879 | ambiguous | 0.4405 | ambiguous | -0.293 | Destabilizing | 0.999 | D | 0.539 | neutral | None | None | None | None | I |
N/R | 0.4385 | ambiguous | 0.4846 | ambiguous | 0.148 | Stabilizing | 0.999 | D | 0.53 | neutral | None | None | None | None | I |
N/S | 0.0919 | likely_benign | 0.1051 | benign | -0.159 | Destabilizing | 0.978 | D | 0.519 | neutral | D | 0.591007689 | None | None | I |
N/T | 0.2555 | likely_benign | 0.3049 | benign | -0.022 | Destabilizing | 0.989 | D | 0.547 | neutral | D | 0.672055556 | None | None | I |
N/V | 0.5558 | ambiguous | 0.6311 | pathogenic | 0.046 | Stabilizing | 0.999 | D | 0.585 | neutral | None | None | None | None | I |
N/W | 0.7903 | likely_pathogenic | 0.8317 | pathogenic | -0.534 | Destabilizing | 1.0 | D | 0.596 | neutral | None | None | None | None | I |
N/Y | 0.2319 | likely_benign | 0.2726 | benign | -0.263 | Destabilizing | 0.999 | D | 0.565 | neutral | D | 0.726479198 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.