Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4903 | 14932;14933;14934 | chr2:178735739;178735738;178735737 | chr2:179600466;179600465;179600464 |
N2AB | 4586 | 13981;13982;13983 | chr2:178735739;178735738;178735737 | chr2:179600466;179600465;179600464 |
N2A | 3659 | 11200;11201;11202 | chr2:178735739;178735738;178735737 | chr2:179600466;179600465;179600464 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1060500444 | None | 0.028 | N | 0.12 | 0.118 | 0.124217242631 | gnomAD-4.0.0 | 1.59139E-06 | None | None | None | None | N | None | 0 | 2.28666E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | None | None | 0.912 | N | 0.259 | 0.116 | 0.241664281697 | gnomAD-4.0.0 | 6.84229E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99454E-07 | 0 | 0 |
K/T | None | None | 0.064 | N | 0.219 | 0.156 | 0.166414681773 | gnomAD-4.0.0 | 6.84229E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99454E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4553 | ambiguous | 0.5558 | ambiguous | -0.182 | Destabilizing | 0.083 | N | 0.171 | neutral | None | None | None | None | N |
K/C | 0.7431 | likely_pathogenic | 0.8095 | pathogenic | -0.303 | Destabilizing | 0.998 | D | 0.371 | neutral | None | None | None | None | N |
K/D | 0.5584 | ambiguous | 0.6722 | pathogenic | 0.138 | Stabilizing | 0.021 | N | 0.181 | neutral | None | None | None | None | N |
K/E | 0.1475 | likely_benign | 0.1919 | benign | 0.176 | Stabilizing | 0.514 | D | 0.279 | neutral | N | 0.373590786 | None | None | N |
K/F | 0.8577 | likely_pathogenic | 0.9082 | pathogenic | -0.168 | Destabilizing | 0.993 | D | 0.394 | neutral | None | None | None | None | N |
K/G | 0.398 | ambiguous | 0.4979 | ambiguous | -0.454 | Destabilizing | 0.737 | D | 0.333 | neutral | None | None | None | None | N |
K/H | 0.3381 | likely_benign | 0.4011 | ambiguous | -0.758 | Destabilizing | 0.98 | D | 0.329 | neutral | None | None | None | None | N |
K/I | 0.5999 | likely_pathogenic | 0.6921 | pathogenic | 0.473 | Stabilizing | 0.96 | D | 0.427 | neutral | None | None | None | None | N |
K/L | 0.4998 | ambiguous | 0.5972 | pathogenic | 0.473 | Stabilizing | 0.872 | D | 0.37 | neutral | None | None | None | None | N |
K/M | 0.3299 | likely_benign | 0.4098 | ambiguous | 0.324 | Stabilizing | 0.991 | D | 0.328 | neutral | N | 0.42731809 | None | None | N |
K/N | 0.4319 | ambiguous | 0.5327 | ambiguous | 0.037 | Stabilizing | 0.028 | N | 0.12 | neutral | N | 0.390472157 | None | None | N |
K/P | 0.8997 | likely_pathogenic | 0.9365 | pathogenic | 0.285 | Stabilizing | 0.932 | D | 0.384 | neutral | None | None | None | None | N |
K/Q | 0.1077 | likely_benign | 0.1311 | benign | -0.142 | Destabilizing | 0.912 | D | 0.321 | neutral | N | 0.394513697 | None | None | N |
K/R | 0.0819 | likely_benign | 0.0887 | benign | -0.226 | Destabilizing | 0.912 | D | 0.259 | neutral | N | 0.420461489 | None | None | N |
K/S | 0.4181 | ambiguous | 0.5225 | ambiguous | -0.562 | Destabilizing | 0.584 | D | 0.3 | neutral | None | None | None | None | N |
K/T | 0.2422 | likely_benign | 0.3151 | benign | -0.352 | Destabilizing | 0.064 | N | 0.219 | neutral | N | 0.398812978 | None | None | N |
K/V | 0.4981 | ambiguous | 0.5879 | pathogenic | 0.285 | Stabilizing | 0.872 | D | 0.375 | neutral | None | None | None | None | N |
K/W | 0.7812 | likely_pathogenic | 0.8463 | pathogenic | -0.084 | Destabilizing | 0.998 | D | 0.459 | neutral | None | None | None | None | N |
K/Y | 0.6822 | likely_pathogenic | 0.7581 | pathogenic | 0.232 | Stabilizing | 0.993 | D | 0.365 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.