Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4904 | 14935;14936;14937 | chr2:178735736;178735735;178735734 | chr2:179600463;179600462;179600461 |
N2AB | 4587 | 13984;13985;13986 | chr2:178735736;178735735;178735734 | chr2:179600463;179600462;179600461 |
N2A | 3660 | 11203;11204;11205 | chr2:178735736;178735735;178735734 | chr2:179600463;179600462;179600461 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.801 | N | 0.307 | 0.176 | 0.130388298395 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
K/R | rs1466517766 | -0.106 | 0.012 | N | 0.178 | 0.118 | 0.167679373172 | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.56E-05 | 1.40607E-04 |
K/R | rs1466517766 | -0.106 | 0.012 | N | 0.178 | 0.118 | 0.167679373172 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/R | rs1466517766 | -0.106 | 0.012 | N | 0.178 | 0.118 | 0.167679373172 | gnomAD-4.0.0 | 3.84316E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78567E-06 | 0 | 2.84414E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2021 | likely_benign | 0.2268 | benign | -0.35 | Destabilizing | 0.525 | D | 0.385 | neutral | None | None | None | None | N |
K/C | 0.637 | likely_pathogenic | 0.6661 | pathogenic | -0.498 | Destabilizing | 0.998 | D | 0.356 | neutral | None | None | None | None | N |
K/D | 0.4047 | ambiguous | 0.4593 | ambiguous | -0.125 | Destabilizing | 0.842 | D | 0.383 | neutral | None | None | None | None | N |
K/E | 0.14 | likely_benign | 0.158 | benign | -0.008 | Destabilizing | 0.801 | D | 0.307 | neutral | N | 0.442349198 | None | None | N |
K/F | 0.62 | likely_pathogenic | 0.6698 | pathogenic | 0.095 | Stabilizing | 0.974 | D | 0.359 | neutral | None | None | None | None | N |
K/G | 0.3082 | likely_benign | 0.3547 | ambiguous | -0.72 | Destabilizing | 0.842 | D | 0.372 | neutral | None | None | None | None | N |
K/H | 0.2651 | likely_benign | 0.2972 | benign | -0.976 | Destabilizing | 0.974 | D | 0.361 | neutral | None | None | None | None | N |
K/I | 0.2367 | likely_benign | 0.266 | benign | 0.606 | Stabilizing | 0.949 | D | 0.394 | neutral | None | None | None | None | N |
K/L | 0.2458 | likely_benign | 0.2779 | benign | 0.606 | Stabilizing | 0.728 | D | 0.366 | neutral | None | None | None | None | N |
K/M | 0.1389 | likely_benign | 0.1508 | benign | 0.268 | Stabilizing | 0.989 | D | 0.359 | neutral | N | 0.490476167 | None | None | N |
K/N | 0.2375 | likely_benign | 0.264 | benign | -0.501 | Destabilizing | 0.801 | D | 0.325 | neutral | N | 0.445740561 | None | None | N |
K/P | 0.3435 | ambiguous | 0.3665 | ambiguous | 0.318 | Stabilizing | 0.002 | N | 0.135 | neutral | None | None | None | None | N |
K/Q | 0.1189 | likely_benign | 0.1339 | benign | -0.494 | Destabilizing | 0.801 | D | 0.361 | neutral | N | 0.451374012 | None | None | N |
K/R | 0.0797 | likely_benign | 0.0856 | benign | -0.665 | Destabilizing | 0.012 | N | 0.178 | neutral | N | 0.447375317 | None | None | N |
K/S | 0.2556 | likely_benign | 0.2895 | benign | -1.05 | Destabilizing | 0.728 | D | 0.285 | neutral | None | None | None | None | N |
K/T | 0.0923 | likely_benign | 0.1033 | benign | -0.735 | Destabilizing | 0.051 | N | 0.193 | neutral | N | 0.435597527 | None | None | N |
K/V | 0.2221 | likely_benign | 0.2489 | benign | 0.318 | Stabilizing | 0.728 | D | 0.359 | neutral | None | None | None | None | N |
K/W | 0.6274 | likely_pathogenic | 0.6795 | pathogenic | 0.15 | Stabilizing | 0.998 | D | 0.511 | neutral | None | None | None | None | N |
K/Y | 0.4695 | ambiguous | 0.51 | ambiguous | 0.417 | Stabilizing | 0.991 | D | 0.347 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.