Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4905 | 14938;14939;14940 | chr2:178735733;178735732;178735731 | chr2:179600460;179600459;179600458 |
N2AB | 4588 | 13987;13988;13989 | chr2:178735733;178735732;178735731 | chr2:179600460;179600459;179600458 |
N2A | 3661 | 11206;11207;11208 | chr2:178735733;178735732;178735731 | chr2:179600460;179600459;179600458 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | None | None | 0.484 | D | 0.753 | 0.52 | 0.6731056941 | gnomAD-4.0.0 | 7.20193E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.87501E-06 | 0 | 0 |
V/I | rs774495507 | -0.633 | None | N | 0.153 | 0.074 | 0.15556083564 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3158 | likely_benign | 0.3186 | benign | -2.031 | Highly Destabilizing | 0.052 | N | 0.508 | neutral | N | 0.353945372 | None | None | N |
V/C | 0.7086 | likely_pathogenic | 0.7131 | pathogenic | -1.671 | Destabilizing | 0.935 | D | 0.702 | prob.neutral | None | None | None | None | N |
V/D | 0.8365 | likely_pathogenic | 0.8439 | pathogenic | -2.343 | Highly Destabilizing | 0.484 | N | 0.753 | deleterious | D | 0.695579277 | None | None | N |
V/E | 0.7791 | likely_pathogenic | 0.7836 | pathogenic | -2.233 | Highly Destabilizing | 0.555 | D | 0.741 | deleterious | None | None | None | None | N |
V/F | 0.2005 | likely_benign | 0.1962 | benign | -1.305 | Destabilizing | 0.062 | N | 0.734 | prob.delet. | N | 0.514457695 | None | None | N |
V/G | 0.4359 | ambiguous | 0.4509 | ambiguous | -2.479 | Highly Destabilizing | 0.484 | N | 0.753 | deleterious | D | 0.595749891 | None | None | N |
V/H | 0.8503 | likely_pathogenic | 0.8476 | pathogenic | -2.044 | Highly Destabilizing | 0.935 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/I | 0.0617 | likely_benign | 0.0599 | benign | -0.837 | Destabilizing | None | N | 0.153 | neutral | N | 0.449977633 | None | None | N |
V/K | 0.8347 | likely_pathogenic | 0.8334 | pathogenic | -1.95 | Destabilizing | 0.555 | D | 0.745 | deleterious | None | None | None | None | N |
V/L | 0.1246 | likely_benign | 0.1207 | benign | -0.837 | Destabilizing | None | N | 0.168 | neutral | N | 0.452808236 | None | None | N |
V/M | 0.1517 | likely_benign | 0.1405 | benign | -0.782 | Destabilizing | 0.38 | N | 0.664 | neutral | None | None | None | None | N |
V/N | 0.6205 | likely_pathogenic | 0.62 | pathogenic | -1.978 | Destabilizing | 0.791 | D | 0.755 | deleterious | None | None | None | None | N |
V/P | 0.8693 | likely_pathogenic | 0.8774 | pathogenic | -1.204 | Destabilizing | 0.791 | D | 0.738 | prob.delet. | None | None | None | None | N |
V/Q | 0.7461 | likely_pathogenic | 0.7447 | pathogenic | -2.004 | Highly Destabilizing | 0.791 | D | 0.722 | prob.delet. | None | None | None | None | N |
V/R | 0.7722 | likely_pathogenic | 0.7707 | pathogenic | -1.482 | Destabilizing | 0.555 | D | 0.757 | deleterious | None | None | None | None | N |
V/S | 0.4768 | ambiguous | 0.479 | ambiguous | -2.565 | Highly Destabilizing | 0.262 | N | 0.699 | prob.neutral | None | None | None | None | N |
V/T | 0.3783 | ambiguous | 0.3718 | ambiguous | -2.328 | Highly Destabilizing | 0.149 | N | 0.601 | neutral | None | None | None | None | N |
V/W | 0.8465 | likely_pathogenic | 0.8399 | pathogenic | -1.65 | Destabilizing | 0.935 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/Y | 0.6269 | likely_pathogenic | 0.6109 | pathogenic | -1.35 | Destabilizing | 0.555 | D | 0.752 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.