Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4907 | 14944;14945;14946 | chr2:178735727;178735726;178735725 | chr2:179600454;179600453;179600452 |
N2AB | 4590 | 13993;13994;13995 | chr2:178735727;178735726;178735725 | chr2:179600454;179600453;179600452 |
N2A | 3663 | 11212;11213;11214 | chr2:178735727;178735726;178735725 | chr2:179600454;179600453;179600452 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | N | 0.798 | 0.437 | 0.499793596984 | gnomAD-4.0.0 | 6.84227E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52207E-05 | None | 0 | 0 | 0 | 0 | 0 |
L/I | rs2081327474 | None | 0.999 | D | 0.591 | 0.48 | 0.498641525541 | gnomAD-4.0.0 | 6.84227E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52207E-05 | None | 0 | 0 | 0 | 0 | 0 |
L/P | None | None | 1.0 | D | 0.905 | 0.842 | 0.907507965639 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6988 | likely_pathogenic | 0.7461 | pathogenic | -2.612 | Highly Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
L/C | 0.732 | likely_pathogenic | 0.7736 | pathogenic | -1.914 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
L/D | 0.9952 | likely_pathogenic | 0.9965 | pathogenic | -3.411 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/E | 0.9617 | likely_pathogenic | 0.9711 | pathogenic | -3.138 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
L/F | 0.1354 | likely_benign | 0.1522 | benign | -1.669 | Destabilizing | 1.0 | D | 0.798 | deleterious | N | 0.39908953 | None | None | N |
L/G | 0.9344 | likely_pathogenic | 0.9479 | pathogenic | -3.142 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
L/H | 0.8513 | likely_pathogenic | 0.8833 | pathogenic | -2.668 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | D | 0.730703279 | None | None | N |
L/I | 0.1221 | likely_benign | 0.1319 | benign | -1.028 | Destabilizing | 0.999 | D | 0.591 | neutral | D | 0.563570563 | None | None | N |
L/K | 0.9259 | likely_pathogenic | 0.9428 | pathogenic | -2.112 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/M | 0.1335 | likely_benign | 0.1454 | benign | -1.058 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
L/N | 0.9752 | likely_pathogenic | 0.9813 | pathogenic | -2.657 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/P | 0.9843 | likely_pathogenic | 0.9893 | pathogenic | -1.546 | Destabilizing | 1.0 | D | 0.905 | deleterious | D | 0.788986181 | None | None | N |
L/Q | 0.8335 | likely_pathogenic | 0.8634 | pathogenic | -2.445 | Highly Destabilizing | 1.0 | D | 0.912 | deleterious | None | None | None | None | N |
L/R | 0.8493 | likely_pathogenic | 0.8762 | pathogenic | -2.023 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | D | 0.788986181 | None | None | N |
L/S | 0.905 | likely_pathogenic | 0.924 | pathogenic | -3.214 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
L/T | 0.7431 | likely_pathogenic | 0.7922 | pathogenic | -2.791 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
L/V | 0.1407 | likely_benign | 0.1562 | benign | -1.546 | Destabilizing | 0.999 | D | 0.615 | neutral | D | 0.679074332 | None | None | N |
L/W | 0.5001 | ambiguous | 0.5442 | ambiguous | -2.038 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
L/Y | 0.6737 | likely_pathogenic | 0.7282 | pathogenic | -1.771 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.