Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4911 | 14956;14957;14958 | chr2:178735715;178735714;178735713 | chr2:179600442;179600441;179600440 |
N2AB | 4594 | 14005;14006;14007 | chr2:178735715;178735714;178735713 | chr2:179600442;179600441;179600440 |
N2A | 3667 | 11224;11225;11226 | chr2:178735715;178735714;178735713 | chr2:179600442;179600441;179600440 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs2081325701 | None | 0.014 | D | 0.241 | 0.202 | 0.468003879618 | gnomAD-4.0.0 | 3.4212E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52169E-05 | None | 0 | 0 | 3.59788E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2582 | likely_benign | 0.2718 | benign | -2.299 | Highly Destabilizing | 0.014 | N | 0.331 | neutral | D | 0.52935795 | None | None | N |
V/C | 0.8859 | likely_pathogenic | 0.8926 | pathogenic | -1.752 | Destabilizing | 0.994 | D | 0.74 | deleterious | None | None | None | None | N |
V/D | 0.9402 | likely_pathogenic | 0.9486 | pathogenic | -3.215 | Highly Destabilizing | 0.978 | D | 0.836 | deleterious | None | None | None | None | N |
V/E | 0.8957 | likely_pathogenic | 0.9042 | pathogenic | -2.984 | Highly Destabilizing | 0.942 | D | 0.811 | deleterious | D | 0.760087314 | None | None | N |
V/F | 0.4108 | ambiguous | 0.4356 | ambiguous | -1.25 | Destabilizing | 0.956 | D | 0.783 | deleterious | None | None | None | None | N |
V/G | 0.5178 | ambiguous | 0.5542 | ambiguous | -2.807 | Highly Destabilizing | 0.89 | D | 0.811 | deleterious | D | 0.700686014 | None | None | N |
V/H | 0.9613 | likely_pathogenic | 0.9664 | pathogenic | -2.583 | Highly Destabilizing | 0.998 | D | 0.808 | deleterious | None | None | None | None | N |
V/I | 0.0966 | likely_benign | 0.0953 | benign | -0.85 | Destabilizing | 0.014 | N | 0.241 | neutral | D | 0.52297544 | None | None | N |
V/K | 0.9342 | likely_pathogenic | 0.9389 | pathogenic | -1.903 | Destabilizing | 0.956 | D | 0.809 | deleterious | None | None | None | None | N |
V/L | 0.3372 | likely_benign | 0.3633 | ambiguous | -0.85 | Destabilizing | 0.489 | N | 0.604 | neutral | D | 0.624881722 | None | None | N |
V/M | 0.2827 | likely_benign | 0.2995 | benign | -0.962 | Destabilizing | 0.956 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/N | 0.8715 | likely_pathogenic | 0.8826 | pathogenic | -2.303 | Highly Destabilizing | 0.978 | D | 0.827 | deleterious | None | None | None | None | N |
V/P | 0.9182 | likely_pathogenic | 0.9285 | pathogenic | -1.312 | Destabilizing | 0.978 | D | 0.805 | deleterious | None | None | None | None | N |
V/Q | 0.9106 | likely_pathogenic | 0.9174 | pathogenic | -2.108 | Highly Destabilizing | 0.978 | D | 0.801 | deleterious | None | None | None | None | N |
V/R | 0.8977 | likely_pathogenic | 0.9011 | pathogenic | -1.716 | Destabilizing | 0.956 | D | 0.819 | deleterious | None | None | None | None | N |
V/S | 0.5919 | likely_pathogenic | 0.6185 | pathogenic | -2.816 | Highly Destabilizing | 0.915 | D | 0.792 | deleterious | None | None | None | None | N |
V/T | 0.3595 | ambiguous | 0.3743 | ambiguous | -2.466 | Highly Destabilizing | 0.86 | D | 0.668 | neutral | None | None | None | None | N |
V/W | 0.9541 | likely_pathogenic | 0.962 | pathogenic | -1.87 | Destabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | N |
V/Y | 0.8713 | likely_pathogenic | 0.8798 | pathogenic | -1.559 | Destabilizing | 0.993 | D | 0.761 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.