Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4916 | 14971;14972;14973 | chr2:178735700;178735699;178735698 | chr2:179600427;179600426;179600425 |
N2AB | 4599 | 14020;14021;14022 | chr2:178735700;178735699;178735698 | chr2:179600427;179600426;179600425 |
N2A | 3672 | 11239;11240;11241 | chr2:178735700;178735699;178735698 | chr2:179600427;179600426;179600425 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs376597173 | 0.2 | 0.959 | N | 0.337 | 0.225 | None | gnomAD-2.1.1 | 7.14E-05 | None | None | None | None | N | None | 4.13E-05 | 8.49E-05 | None | 0 | 0 | None | 0 | None | 0 | 1.24957E-04 | 0 |
K/E | rs376597173 | 0.2 | 0.959 | N | 0.337 | 0.225 | None | gnomAD-3.1.2 | 1.31403E-04 | None | None | None | None | N | None | 9.65E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.20459E-04 | 0 | 4.78011E-04 |
K/E | rs376597173 | 0.2 | 0.959 | N | 0.337 | 0.225 | None | gnomAD-4.0.0 | 1.1898E-04 | None | None | None | None | N | None | 6.67289E-05 | 8.33528E-05 | None | 0 | 0 | None | 0 | 0 | 1.47479E-04 | 0 | 1.28094E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2701 | likely_benign | 0.3367 | benign | 0.06 | Stabilizing | 0.079 | N | 0.192 | neutral | None | None | None | None | N |
K/C | 0.7014 | likely_pathogenic | 0.7868 | pathogenic | -0.284 | Destabilizing | 0.999 | D | 0.468 | neutral | None | None | None | None | N |
K/D | 0.4117 | ambiguous | 0.5112 | ambiguous | -0.088 | Destabilizing | 0.969 | D | 0.439 | neutral | None | None | None | None | N |
K/E | 0.1399 | likely_benign | 0.1814 | benign | -0.089 | Destabilizing | 0.959 | D | 0.337 | neutral | N | 0.489923653 | None | None | N |
K/F | 0.7074 | likely_pathogenic | 0.7876 | pathogenic | -0.198 | Destabilizing | 0.997 | D | 0.473 | neutral | None | None | None | None | N |
K/G | 0.3618 | ambiguous | 0.4393 | ambiguous | -0.109 | Destabilizing | 0.007 | N | 0.236 | neutral | None | None | None | None | N |
K/H | 0.3073 | likely_benign | 0.3622 | ambiguous | -0.311 | Destabilizing | 0.999 | D | 0.405 | neutral | None | None | None | None | N |
K/I | 0.3434 | ambiguous | 0.4207 | ambiguous | 0.423 | Stabilizing | 0.988 | D | 0.479 | neutral | N | 0.515823936 | None | None | N |
K/L | 0.2874 | likely_benign | 0.3385 | benign | 0.423 | Stabilizing | 0.939 | D | 0.447 | neutral | None | None | None | None | N |
K/M | 0.1944 | likely_benign | 0.2297 | benign | 0.092 | Stabilizing | 0.999 | D | 0.401 | neutral | None | None | None | None | N |
K/N | 0.2929 | likely_benign | 0.3588 | ambiguous | 0.143 | Stabilizing | 0.959 | D | 0.373 | neutral | D | 0.533807268 | None | None | N |
K/P | 0.4959 | ambiguous | 0.5974 | pathogenic | 0.329 | Stabilizing | 0.991 | D | 0.413 | neutral | None | None | None | None | N |
K/Q | 0.1366 | likely_benign | 0.1641 | benign | -0.002 | Destabilizing | 0.996 | D | 0.405 | neutral | N | 0.498320661 | None | None | N |
K/R | 0.0967 | likely_benign | 0.1052 | benign | -0.082 | Destabilizing | 0.959 | D | 0.349 | neutral | N | 0.502320989 | None | None | N |
K/S | 0.3448 | ambiguous | 0.4305 | ambiguous | -0.264 | Destabilizing | 0.759 | D | 0.345 | neutral | None | None | None | None | N |
K/T | 0.1625 | likely_benign | 0.2084 | benign | -0.132 | Destabilizing | 0.92 | D | 0.393 | neutral | N | 0.484473168 | None | None | N |
K/V | 0.3112 | likely_benign | 0.3904 | ambiguous | 0.329 | Stabilizing | 0.939 | D | 0.475 | neutral | None | None | None | None | N |
K/W | 0.7399 | likely_pathogenic | 0.8092 | pathogenic | -0.271 | Destabilizing | 0.999 | D | 0.519 | neutral | None | None | None | None | N |
K/Y | 0.5731 | likely_pathogenic | 0.6556 | pathogenic | 0.085 | Stabilizing | 0.997 | D | 0.465 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.