Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4926 | 15001;15002;15003 | chr2:178735670;178735669;178735668 | chr2:179600397;179600396;179600395 |
N2AB | 4609 | 14050;14051;14052 | chr2:178735670;178735669;178735668 | chr2:179600397;179600396;179600395 |
N2A | 3682 | 11269;11270;11271 | chr2:178735670;178735669;178735668 | chr2:179600397;179600396;179600395 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/P | rs751919672 | 0.22 | 0.662 | D | 0.357 | 0.416 | 0.507928266286 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2032 | likely_benign | 0.2556 | benign | -0.137 | Destabilizing | 0.187 | N | 0.319 | neutral | None | None | None | None | N |
Q/C | 0.4164 | ambiguous | 0.5156 | ambiguous | 0.095 | Stabilizing | 0.991 | D | 0.266 | neutral | None | None | None | None | N |
Q/D | 0.3234 | likely_benign | 0.433 | ambiguous | 0.073 | Stabilizing | 0.209 | N | 0.197 | neutral | None | None | None | None | N |
Q/E | 0.0885 | likely_benign | 0.1036 | benign | 0.033 | Stabilizing | 0.08 | N | 0.177 | neutral | N | 0.482466204 | None | None | N |
Q/F | 0.4682 | ambiguous | 0.5763 | pathogenic | -0.456 | Destabilizing | 0.901 | D | 0.348 | neutral | None | None | None | None | N |
Q/G | 0.2113 | likely_benign | 0.2783 | benign | -0.286 | Destabilizing | 0.209 | N | 0.311 | neutral | None | None | None | None | N |
Q/H | 0.1496 | likely_benign | 0.1862 | benign | -0.152 | Destabilizing | 0.003 | N | 0.194 | neutral | N | 0.516218141 | None | None | N |
Q/I | 0.2259 | likely_benign | 0.2626 | benign | 0.158 | Stabilizing | 0.722 | D | 0.381 | neutral | None | None | None | None | N |
Q/K | 0.0773 | likely_benign | 0.0874 | benign | 0.114 | Stabilizing | None | N | 0.143 | neutral | N | 0.396433991 | None | None | N |
Q/L | 0.1069 | likely_benign | 0.1254 | benign | 0.158 | Stabilizing | 0.285 | N | 0.3 | neutral | N | 0.517006805 | None | None | N |
Q/M | 0.2645 | likely_benign | 0.3013 | benign | 0.298 | Stabilizing | 0.965 | D | 0.18 | neutral | None | None | None | None | N |
Q/N | 0.2039 | likely_benign | 0.2578 | benign | -0.224 | Destabilizing | 0.002 | N | 0.177 | neutral | None | None | None | None | N |
Q/P | 0.2861 | likely_benign | 0.3954 | ambiguous | 0.086 | Stabilizing | 0.662 | D | 0.357 | neutral | D | 0.628711969 | None | None | N |
Q/R | 0.0902 | likely_benign | 0.1062 | benign | 0.261 | Stabilizing | 0.001 | N | 0.187 | neutral | N | 0.506227387 | None | None | N |
Q/S | 0.2293 | likely_benign | 0.2924 | benign | -0.205 | Destabilizing | 0.103 | N | 0.201 | neutral | None | None | None | None | N |
Q/T | 0.1905 | likely_benign | 0.2323 | benign | -0.098 | Destabilizing | 0.345 | N | 0.318 | neutral | None | None | None | None | N |
Q/V | 0.1772 | likely_benign | 0.2075 | benign | 0.086 | Stabilizing | 0.722 | D | 0.345 | neutral | None | None | None | None | N |
Q/W | 0.3255 | likely_benign | 0.4303 | ambiguous | -0.484 | Destabilizing | 0.991 | D | 0.265 | neutral | None | None | None | None | N |
Q/Y | 0.2944 | likely_benign | 0.3794 | ambiguous | -0.202 | Destabilizing | 0.39 | N | 0.362 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.