Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4927 | 15004;15005;15006 | chr2:178735667;178735666;178735665 | chr2:179600394;179600393;179600392 |
N2AB | 4610 | 14053;14054;14055 | chr2:178735667;178735666;178735665 | chr2:179600394;179600393;179600392 |
N2A | 3683 | 11272;11273;11274 | chr2:178735667;178735666;178735665 | chr2:179600394;179600393;179600392 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs780599464 | 0.2 | 0.007 | N | 0.291 | 0.129 | 0.126345400529 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
K/N | rs780599464 | 0.2 | 0.007 | N | 0.291 | 0.129 | 0.126345400529 | gnomAD-4.0.0 | 6.84233E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52156E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2364 | likely_benign | 0.289 | benign | 0.005 | Stabilizing | 0.575 | D | 0.569 | neutral | None | None | None | None | N |
K/C | 0.5477 | ambiguous | 0.6185 | pathogenic | -0.262 | Destabilizing | 0.991 | D | 0.749 | deleterious | None | None | None | None | N |
K/D | 0.4007 | ambiguous | 0.5006 | ambiguous | 0.168 | Stabilizing | 0.404 | N | 0.565 | neutral | None | None | None | None | N |
K/E | 0.1441 | likely_benign | 0.1845 | benign | 0.186 | Stabilizing | 0.013 | N | 0.329 | neutral | N | 0.439928017 | None | None | N |
K/F | 0.5055 | ambiguous | 0.5748 | pathogenic | -0.157 | Destabilizing | 0.967 | D | 0.691 | prob.neutral | None | None | None | None | N |
K/G | 0.3354 | likely_benign | 0.3965 | ambiguous | -0.207 | Destabilizing | 0.404 | N | 0.577 | neutral | None | None | None | None | N |
K/H | 0.2175 | likely_benign | 0.2463 | benign | -0.462 | Destabilizing | 0.826 | D | 0.625 | neutral | None | None | None | None | N |
K/I | 0.1692 | likely_benign | 0.2035 | benign | 0.487 | Stabilizing | 0.879 | D | 0.695 | prob.neutral | N | 0.514763418 | None | None | N |
K/L | 0.1988 | likely_benign | 0.2325 | benign | 0.487 | Stabilizing | 0.575 | D | 0.551 | neutral | None | None | None | None | N |
K/M | 0.1422 | likely_benign | 0.1631 | benign | 0.202 | Stabilizing | 0.991 | D | 0.626 | neutral | None | None | None | None | N |
K/N | 0.2394 | likely_benign | 0.29 | benign | 0.17 | Stabilizing | 0.007 | N | 0.291 | neutral | N | 0.514434445 | None | None | N |
K/P | 0.3303 | likely_benign | 0.3943 | ambiguous | 0.355 | Stabilizing | 0.906 | D | 0.62 | neutral | None | None | None | None | N |
K/Q | 0.1087 | likely_benign | 0.1226 | benign | 0.033 | Stabilizing | 0.505 | D | 0.553 | neutral | N | 0.398710167 | None | None | N |
K/R | 0.0797 | likely_benign | 0.0825 | benign | -0.079 | Destabilizing | 0.007 | N | 0.299 | neutral | N | 0.504000445 | None | None | N |
K/S | 0.2699 | likely_benign | 0.3317 | benign | -0.332 | Destabilizing | 0.404 | N | 0.534 | neutral | None | None | None | None | N |
K/T | 0.1269 | likely_benign | 0.153 | benign | -0.158 | Destabilizing | 0.338 | N | 0.551 | neutral | N | 0.51314631 | None | None | N |
K/V | 0.1818 | likely_benign | 0.2219 | benign | 0.355 | Stabilizing | 0.906 | D | 0.594 | neutral | None | None | None | None | N |
K/W | 0.5726 | likely_pathogenic | 0.6277 | pathogenic | -0.174 | Destabilizing | 0.991 | D | 0.741 | deleterious | None | None | None | None | N |
K/Y | 0.3844 | ambiguous | 0.4454 | ambiguous | 0.179 | Stabilizing | 0.967 | D | 0.675 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.