Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4929 | 15010;15011;15012 | chr2:178735661;178735660;178735659 | chr2:179600388;179600387;179600386 |
N2AB | 4612 | 14059;14060;14061 | chr2:178735661;178735660;178735659 | chr2:179600388;179600387;179600386 |
N2A | 3685 | 11278;11279;11280 | chr2:178735661;178735660;178735659 | chr2:179600388;179600387;179600386 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs2081317152 | None | 0.625 | N | 0.289 | 0.418 | 0.279370189704 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/A | rs2081317152 | None | 0.625 | N | 0.289 | 0.418 | 0.279370189704 | gnomAD-4.0.0 | 6.57229E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47011E-05 | 0 | 0 |
P/S | None | None | 0.891 | N | 0.273 | 0.417 | 0.286848849266 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.069 | likely_benign | 0.0729 | benign | -0.793 | Destabilizing | 0.625 | D | 0.289 | neutral | N | 0.409413464 | None | None | N |
P/C | 0.2612 | likely_benign | 0.3453 | ambiguous | -0.812 | Destabilizing | 0.998 | D | 0.422 | neutral | None | None | None | None | N |
P/D | 0.3438 | ambiguous | 0.4644 | ambiguous | -0.562 | Destabilizing | 0.915 | D | 0.324 | neutral | None | None | None | None | N |
P/E | 0.2164 | likely_benign | 0.2912 | benign | -0.576 | Destabilizing | 0.842 | D | 0.273 | neutral | None | None | None | None | N |
P/F | 0.1517 | likely_benign | 0.198 | benign | -0.664 | Destabilizing | 0.949 | D | 0.418 | neutral | None | None | None | None | N |
P/G | 0.1908 | likely_benign | 0.2397 | benign | -1.007 | Destabilizing | 0.915 | D | 0.324 | neutral | None | None | None | None | N |
P/H | 0.1009 | likely_benign | 0.1229 | benign | -0.306 | Destabilizing | 0.012 | N | 0.224 | neutral | N | 0.442620588 | None | None | N |
P/I | 0.1035 | likely_benign | 0.127 | benign | -0.321 | Destabilizing | 0.904 | D | 0.384 | neutral | None | None | None | None | N |
P/K | 0.1895 | likely_benign | 0.2513 | benign | -0.649 | Destabilizing | 0.728 | D | 0.295 | neutral | None | None | None | None | N |
P/L | 0.0557 | likely_benign | 0.0607 | benign | -0.321 | Destabilizing | 0.012 | N | 0.246 | neutral | N | 0.411414876 | None | None | N |
P/M | 0.1382 | likely_benign | 0.1624 | benign | -0.632 | Destabilizing | 0.949 | D | 0.375 | neutral | None | None | None | None | N |
P/N | 0.1777 | likely_benign | 0.2371 | benign | -0.591 | Destabilizing | 0.842 | D | 0.359 | neutral | None | None | None | None | N |
P/Q | 0.092 | likely_benign | 0.1101 | benign | -0.694 | Destabilizing | 0.949 | D | 0.333 | neutral | None | None | None | None | N |
P/R | 0.1322 | likely_benign | 0.1688 | benign | -0.222 | Destabilizing | 0.012 | N | 0.237 | neutral | N | 0.408187479 | None | None | N |
P/S | 0.0815 | likely_benign | 0.0932 | benign | -1.004 | Destabilizing | 0.891 | D | 0.273 | neutral | N | 0.356738818 | None | None | N |
P/T | 0.0743 | likely_benign | 0.0826 | benign | -0.902 | Destabilizing | 0.891 | D | 0.327 | neutral | N | 0.391615733 | None | None | N |
P/V | 0.0915 | likely_benign | 0.1072 | benign | -0.447 | Destabilizing | 0.728 | D | 0.339 | neutral | None | None | None | None | N |
P/W | 0.2989 | likely_benign | 0.3918 | ambiguous | -0.778 | Destabilizing | 0.998 | D | 0.473 | neutral | None | None | None | None | N |
P/Y | 0.179 | likely_benign | 0.2352 | benign | -0.486 | Destabilizing | 0.949 | D | 0.398 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.