Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4933 | 15022;15023;15024 | chr2:178735649;178735648;178735647 | chr2:179600376;179600375;179600374 |
N2AB | 4616 | 14071;14072;14073 | chr2:178735649;178735648;178735647 | chr2:179600376;179600375;179600374 |
N2A | 3689 | 11290;11291;11292 | chr2:178735649;178735648;178735647 | chr2:179600376;179600375;179600374 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | rs984284016 | 0.115 | 1.0 | N | 0.718 | 0.365 | 0.439445477881 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
D/Y | rs984284016 | 0.115 | 1.0 | N | 0.718 | 0.365 | 0.439445477881 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/Y | rs984284016 | 0.115 | 1.0 | N | 0.718 | 0.365 | 0.439445477881 | gnomAD-4.0.0 | 6.57056E-06 | None | None | None | None | N | None | 2.41173E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2152 | likely_benign | 0.2935 | benign | -0.307 | Destabilizing | 0.996 | D | 0.675 | neutral | N | 0.436631027 | None | None | N |
D/C | 0.7072 | likely_pathogenic | 0.7973 | pathogenic | -0.217 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
D/E | 0.1818 | likely_benign | 0.212 | benign | -0.289 | Destabilizing | 0.996 | D | 0.419 | neutral | N | 0.448741878 | None | None | N |
D/F | 0.5588 | ambiguous | 0.6588 | pathogenic | 0.116 | Stabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
D/G | 0.191 | likely_benign | 0.2629 | benign | -0.579 | Destabilizing | 0.998 | D | 0.669 | neutral | N | 0.446411319 | None | None | N |
D/H | 0.3901 | ambiguous | 0.5088 | ambiguous | 0.192 | Stabilizing | 1.0 | D | 0.696 | prob.neutral | N | 0.434250805 | None | None | N |
D/I | 0.346 | ambiguous | 0.4466 | ambiguous | 0.386 | Stabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
D/K | 0.5505 | ambiguous | 0.6782 | pathogenic | 0.059 | Stabilizing | 0.91 | D | 0.319 | neutral | None | None | None | None | N |
D/L | 0.4459 | ambiguous | 0.5466 | ambiguous | 0.386 | Stabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
D/M | 0.6362 | likely_pathogenic | 0.7359 | pathogenic | 0.429 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
D/N | 0.1265 | likely_benign | 0.1563 | benign | -0.399 | Destabilizing | 0.999 | D | 0.651 | neutral | N | 0.444179912 | None | None | N |
D/P | 0.7537 | likely_pathogenic | 0.8284 | pathogenic | 0.179 | Stabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
D/Q | 0.4501 | ambiguous | 0.5705 | pathogenic | -0.291 | Destabilizing | 0.999 | D | 0.668 | neutral | None | None | None | None | N |
D/R | 0.5718 | likely_pathogenic | 0.7018 | pathogenic | 0.341 | Stabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | N |
D/S | 0.1781 | likely_benign | 0.2353 | benign | -0.547 | Destabilizing | 0.997 | D | 0.577 | neutral | None | None | None | None | N |
D/T | 0.2927 | likely_benign | 0.3868 | ambiguous | -0.321 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
D/V | 0.2327 | likely_benign | 0.3095 | benign | 0.179 | Stabilizing | 0.999 | D | 0.7 | prob.neutral | N | 0.437449602 | None | None | N |
D/W | 0.8802 | likely_pathogenic | 0.9266 | pathogenic | 0.323 | Stabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
D/Y | 0.2106 | likely_benign | 0.2804 | benign | 0.366 | Stabilizing | 1.0 | D | 0.718 | prob.delet. | N | 0.350531108 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.