Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4936 | 15031;15032;15033 | chr2:178735640;178735639;178735638 | chr2:179600367;179600366;179600365 |
N2AB | 4619 | 14080;14081;14082 | chr2:178735640;178735639;178735638 | chr2:179600367;179600366;179600365 |
N2A | 3692 | 11299;11300;11301 | chr2:178735640;178735639;178735638 | chr2:179600367;179600366;179600365 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.019 | N | 0.282 | 0.175 | 0.551009825273 | gnomAD-4.0.0 | 6.8426E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99467E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4342 | ambiguous | 0.4814 | ambiguous | -2.073 | Highly Destabilizing | 0.055 | N | 0.402 | neutral | None | None | None | None | N |
I/C | 0.6749 | likely_pathogenic | 0.7184 | pathogenic | -1.28 | Destabilizing | 0.958 | D | 0.578 | neutral | None | None | None | None | N |
I/D | 0.7762 | likely_pathogenic | 0.8181 | pathogenic | -1.55 | Destabilizing | 0.859 | D | 0.65 | neutral | None | None | None | None | N |
I/E | 0.6682 | likely_pathogenic | 0.7211 | pathogenic | -1.444 | Destabilizing | 0.667 | D | 0.657 | neutral | None | None | None | None | N |
I/F | 0.1137 | likely_benign | 0.1296 | benign | -1.326 | Destabilizing | 0.001 | N | 0.275 | neutral | N | 0.516937466 | None | None | N |
I/G | 0.6847 | likely_pathogenic | 0.7316 | pathogenic | -2.511 | Highly Destabilizing | 0.364 | N | 0.661 | neutral | None | None | None | None | N |
I/H | 0.5475 | ambiguous | 0.5896 | pathogenic | -1.751 | Destabilizing | 0.958 | D | 0.633 | neutral | None | None | None | None | N |
I/K | 0.5161 | ambiguous | 0.5773 | pathogenic | -1.439 | Destabilizing | 0.497 | N | 0.659 | neutral | None | None | None | None | N |
I/L | 0.1085 | likely_benign | 0.1167 | benign | -0.879 | Destabilizing | None | N | 0.115 | neutral | N | 0.505880353 | None | None | N |
I/M | 0.0887 | likely_benign | 0.0983 | benign | -0.701 | Destabilizing | 0.019 | N | 0.282 | neutral | N | 0.507406558 | None | None | N |
I/N | 0.3304 | likely_benign | 0.36 | ambiguous | -1.413 | Destabilizing | 0.602 | D | 0.645 | neutral | D | 0.655809071 | None | None | N |
I/P | 0.7635 | likely_pathogenic | 0.7989 | pathogenic | -1.25 | Destabilizing | 0.859 | D | 0.645 | neutral | None | None | None | None | N |
I/Q | 0.5143 | ambiguous | 0.57 | pathogenic | -1.443 | Destabilizing | 0.667 | D | 0.643 | neutral | None | None | None | None | N |
I/R | 0.4048 | ambiguous | 0.4579 | ambiguous | -0.995 | Destabilizing | 0.667 | D | 0.644 | neutral | None | None | None | None | N |
I/S | 0.3672 | ambiguous | 0.4043 | ambiguous | -2.127 | Highly Destabilizing | 0.175 | N | 0.588 | neutral | D | 0.573662045 | None | None | N |
I/T | 0.3381 | likely_benign | 0.3628 | ambiguous | -1.882 | Destabilizing | 0.175 | N | 0.517 | neutral | D | 0.556207529 | None | None | N |
I/V | 0.1063 | likely_benign | 0.1138 | benign | -1.25 | Destabilizing | None | N | 0.147 | neutral | N | 0.502413536 | None | None | N |
I/W | 0.6766 | likely_pathogenic | 0.7276 | pathogenic | -1.507 | Destabilizing | 0.958 | D | 0.645 | neutral | None | None | None | None | N |
I/Y | 0.3595 | ambiguous | 0.3939 | ambiguous | -1.252 | Destabilizing | 0.331 | N | 0.611 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.