Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4939 | 15040;15041;15042 | chr2:178735631;178735630;178735629 | chr2:179600358;179600357;179600356 |
N2AB | 4622 | 14089;14090;14091 | chr2:178735631;178735630;178735629 | chr2:179600358;179600357;179600356 |
N2A | 3695 | 11308;11309;11310 | chr2:178735631;178735630;178735629 | chr2:179600358;179600357;179600356 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.998 | N | 0.376 | 0.184 | 0.479893544335 | gnomAD-4.0.0 | 1.59166E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85843E-06 | 0 | 0 |
E/Q | rs2081311155 | None | 0.996 | N | 0.511 | 0.307 | 0.518858945281 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/Q | rs2081311155 | None | 0.996 | N | 0.511 | 0.307 | 0.518858945281 | gnomAD-4.0.0 | 6.57134E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4699E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1713 | likely_benign | 0.1833 | benign | -0.468 | Destabilizing | 0.996 | D | 0.539 | neutral | D | 0.57697762 | None | None | N |
E/C | 0.809 | likely_pathogenic | 0.835 | pathogenic | -0.346 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
E/D | 0.1505 | likely_benign | 0.1609 | benign | -0.358 | Destabilizing | 0.998 | D | 0.376 | neutral | N | 0.50341418 | None | None | N |
E/F | 0.7071 | likely_pathogenic | 0.7386 | pathogenic | -0.153 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
E/G | 0.1821 | likely_benign | 0.1953 | benign | -0.671 | Destabilizing | 0.999 | D | 0.622 | neutral | N | 0.51438237 | None | None | N |
E/H | 0.3834 | ambiguous | 0.4072 | ambiguous | 0.286 | Stabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | N |
E/I | 0.3074 | likely_benign | 0.3378 | benign | 0.041 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/K | 0.1143 | likely_benign | 0.123 | benign | 0.182 | Stabilizing | 0.767 | D | 0.257 | neutral | N | 0.507653325 | None | None | N |
E/L | 0.3767 | ambiguous | 0.4084 | ambiguous | 0.041 | Stabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
E/M | 0.4248 | ambiguous | 0.454 | ambiguous | -0.011 | Destabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | N |
E/N | 0.2725 | likely_benign | 0.2905 | benign | -0.298 | Destabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | N |
E/P | 0.8482 | likely_pathogenic | 0.8549 | pathogenic | -0.11 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/Q | 0.1208 | likely_benign | 0.126 | benign | -0.229 | Destabilizing | 0.996 | D | 0.511 | neutral | N | 0.508699155 | None | None | N |
E/R | 0.1923 | likely_benign | 0.2052 | benign | 0.537 | Stabilizing | 0.998 | D | 0.595 | neutral | None | None | None | None | N |
E/S | 0.2051 | likely_benign | 0.2138 | benign | -0.446 | Destabilizing | 0.997 | D | 0.498 | neutral | None | None | None | None | N |
E/T | 0.1978 | likely_benign | 0.2099 | benign | -0.268 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
E/V | 0.1944 | likely_benign | 0.2135 | benign | -0.11 | Destabilizing | 0.999 | D | 0.686 | prob.neutral | D | 0.564338338 | None | None | N |
E/W | 0.8128 | likely_pathogenic | 0.8361 | pathogenic | 0.063 | Stabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
E/Y | 0.563 | ambiguous | 0.5968 | pathogenic | 0.099 | Stabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.