Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4941 | 15046;15047;15048 | chr2:178735625;178735624;178735623 | chr2:179600352;179600351;179600350 |
N2AB | 4624 | 14095;14096;14097 | chr2:178735625;178735624;178735623 | chr2:179600352;179600351;179600350 |
N2A | 3697 | 11314;11315;11316 | chr2:178735625;178735624;178735623 | chr2:179600352;179600351;179600350 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 1.0 | D | 0.724 | 0.467 | 0.499281839539 | gnomAD-4.0.0 | 1.36856E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31884E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6512 | likely_pathogenic | 0.6794 | pathogenic | -0.749 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
K/C | 0.7816 | likely_pathogenic | 0.7952 | pathogenic | -0.843 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/D | 0.7503 | likely_pathogenic | 0.7773 | pathogenic | -0.573 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
K/E | 0.321 | likely_benign | 0.3436 | ambiguous | -0.397 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | D | 0.556712042 | None | None | N |
K/F | 0.9171 | likely_pathogenic | 0.9295 | pathogenic | -0.187 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
K/G | 0.5372 | ambiguous | 0.5542 | ambiguous | -1.179 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
K/H | 0.4474 | ambiguous | 0.4807 | ambiguous | -1.5 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
K/I | 0.7407 | likely_pathogenic | 0.7683 | pathogenic | 0.402 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | D | 0.696169674 | None | None | N |
K/L | 0.6442 | likely_pathogenic | 0.6714 | pathogenic | 0.402 | Stabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
K/M | 0.4015 | ambiguous | 0.4212 | ambiguous | 0.148 | Stabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | N |
K/N | 0.5523 | ambiguous | 0.5672 | pathogenic | -0.972 | Destabilizing | 1.0 | D | 0.755 | deleterious | D | 0.573673894 | None | None | N |
K/P | 0.9299 | likely_pathogenic | 0.936 | pathogenic | 0.047 | Stabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
K/Q | 0.238 | likely_benign | 0.255 | benign | -0.879 | Destabilizing | 1.0 | D | 0.752 | deleterious | D | 0.653722031 | None | None | N |
K/R | 0.1017 | likely_benign | 0.108 | benign | -0.92 | Destabilizing | 0.999 | D | 0.615 | neutral | D | 0.606297485 | None | None | N |
K/S | 0.6357 | likely_pathogenic | 0.6637 | pathogenic | -1.568 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/T | 0.3885 | ambiguous | 0.4269 | ambiguous | -1.166 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | D | 0.599026593 | None | None | N |
K/V | 0.7004 | likely_pathogenic | 0.7301 | pathogenic | 0.047 | Stabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
K/W | 0.8766 | likely_pathogenic | 0.8984 | pathogenic | -0.143 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/Y | 0.7657 | likely_pathogenic | 0.8014 | pathogenic | 0.171 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.