Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4951 | 15076;15077;15078 | chr2:178735595;178735594;178735593 | chr2:179600322;179600321;179600320 |
N2AB | 4634 | 14125;14126;14127 | chr2:178735595;178735594;178735593 | chr2:179600322;179600321;179600320 |
N2A | 3707 | 11344;11345;11346 | chr2:178735595;178735594;178735593 | chr2:179600322;179600321;179600320 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1235893686 | 0.028 | 0.98 | N | 0.442 | 0.287 | 0.549671953984 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
K/R | rs1235893686 | 0.028 | 0.98 | N | 0.442 | 0.287 | 0.549671953984 | gnomAD-4.0.0 | 2.05335E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99573E-07 | 2.32072E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5175 | ambiguous | 0.5793 | pathogenic | -0.379 | Destabilizing | 0.985 | D | 0.403 | neutral | None | None | None | None | I |
K/C | 0.7878 | likely_pathogenic | 0.8295 | pathogenic | -0.398 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
K/D | 0.8098 | likely_pathogenic | 0.8461 | pathogenic | 0.074 | Stabilizing | 0.971 | D | 0.439 | neutral | None | None | None | None | I |
K/E | 0.4248 | ambiguous | 0.4791 | ambiguous | 0.176 | Stabilizing | 0.4 | N | 0.278 | neutral | N | 0.509431111 | None | None | I |
K/F | 0.8597 | likely_pathogenic | 0.8831 | pathogenic | -0.082 | Destabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | I |
K/G | 0.5324 | ambiguous | 0.599 | pathogenic | -0.729 | Destabilizing | 0.993 | D | 0.433 | neutral | None | None | None | None | I |
K/H | 0.3873 | ambiguous | 0.4246 | ambiguous | -0.975 | Destabilizing | 1.0 | D | 0.475 | neutral | None | None | None | None | I |
K/I | 0.6373 | likely_pathogenic | 0.6765 | pathogenic | 0.514 | Stabilizing | 0.994 | D | 0.652 | neutral | D | 0.584508556 | None | None | I |
K/L | 0.5243 | ambiguous | 0.5702 | pathogenic | 0.514 | Stabilizing | 0.985 | D | 0.435 | neutral | None | None | None | None | I |
K/M | 0.43 | ambiguous | 0.4732 | ambiguous | 0.272 | Stabilizing | 1.0 | D | 0.479 | neutral | None | None | None | None | I |
K/N | 0.6428 | likely_pathogenic | 0.6819 | pathogenic | -0.26 | Destabilizing | 0.997 | D | 0.406 | neutral | N | 0.511504695 | None | None | I |
K/P | 0.8916 | likely_pathogenic | 0.9098 | pathogenic | 0.247 | Stabilizing | 0.999 | D | 0.471 | neutral | None | None | None | None | I |
K/Q | 0.21 | likely_benign | 0.2333 | benign | -0.292 | Destabilizing | 0.994 | D | 0.453 | neutral | N | 0.397572079 | None | None | I |
K/R | 0.0797 | likely_benign | 0.0847 | benign | -0.451 | Destabilizing | 0.98 | D | 0.442 | neutral | N | 0.51246786 | None | None | I |
K/S | 0.579 | likely_pathogenic | 0.6373 | pathogenic | -0.878 | Destabilizing | 0.971 | D | 0.427 | neutral | None | None | None | None | I |
K/T | 0.3388 | likely_benign | 0.3769 | ambiguous | -0.572 | Destabilizing | 0.4 | N | 0.303 | neutral | N | 0.508159963 | None | None | I |
K/V | 0.5153 | ambiguous | 0.5578 | ambiguous | 0.247 | Stabilizing | 0.996 | D | 0.441 | neutral | None | None | None | None | I |
K/W | 0.8287 | likely_pathogenic | 0.8591 | pathogenic | -0.002 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | I |
K/Y | 0.7596 | likely_pathogenic | 0.79 | pathogenic | 0.282 | Stabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.