Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4952 | 15079;15080;15081 | chr2:178735592;178735591;178735590 | chr2:179600319;179600318;179600317 |
N2AB | 4635 | 14128;14129;14130 | chr2:178735592;178735591;178735590 | chr2:179600319;179600318;179600317 |
N2A | 3708 | 11347;11348;11349 | chr2:178735592;178735591;178735590 | chr2:179600319;179600318;179600317 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | rs781546825 | -0.259 | 0.864 | N | 0.555 | 0.144 | 0.322230723748 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1719 | likely_benign | 0.1847 | benign | -0.946 | Destabilizing | 0.547 | D | 0.46 | neutral | None | None | None | None | I |
L/C | 0.5079 | ambiguous | 0.4921 | ambiguous | -0.794 | Destabilizing | 0.985 | D | 0.548 | neutral | None | None | None | None | I |
L/D | 0.5472 | ambiguous | 0.5899 | pathogenic | -0.262 | Destabilizing | 0.945 | D | 0.62 | neutral | None | None | None | None | I |
L/E | 0.2612 | likely_benign | 0.2821 | benign | -0.317 | Destabilizing | 0.945 | D | 0.613 | neutral | None | None | None | None | I |
L/F | 0.132 | likely_benign | 0.1385 | benign | -0.726 | Destabilizing | 0.894 | D | 0.531 | neutral | None | None | None | None | I |
L/G | 0.3159 | likely_benign | 0.339 | benign | -1.17 | Destabilizing | 0.945 | D | 0.611 | neutral | None | None | None | None | I |
L/H | 0.2057 | likely_benign | 0.2223 | benign | -0.321 | Destabilizing | 0.995 | D | 0.627 | neutral | None | None | None | None | I |
L/I | 0.0697 | likely_benign | 0.07 | benign | -0.455 | Destabilizing | 0.007 | N | 0.296 | neutral | None | None | None | None | I |
L/K | 0.2064 | likely_benign | 0.2175 | benign | -0.596 | Destabilizing | 0.945 | D | 0.552 | neutral | None | None | None | None | I |
L/M | 0.0884 | likely_benign | 0.0948 | benign | -0.496 | Destabilizing | 0.864 | D | 0.555 | neutral | N | 0.45477368 | None | None | I |
L/N | 0.2626 | likely_benign | 0.289 | benign | -0.425 | Destabilizing | 0.981 | D | 0.622 | neutral | None | None | None | None | I |
L/P | 0.1256 | likely_benign | 0.1294 | benign | -0.585 | Destabilizing | 0.975 | D | 0.621 | neutral | N | 0.424754471 | None | None | I |
L/Q | 0.1108 | likely_benign | 0.1193 | benign | -0.613 | Destabilizing | 0.975 | D | 0.566 | neutral | N | 0.424969322 | None | None | I |
L/R | 0.1762 | likely_benign | 0.1752 | benign | -0.015 | Destabilizing | 0.928 | D | 0.569 | neutral | N | 0.349772382 | None | None | I |
L/S | 0.2064 | likely_benign | 0.2255 | benign | -0.967 | Destabilizing | 0.894 | D | 0.553 | neutral | None | None | None | None | I |
L/T | 0.1621 | likely_benign | 0.1747 | benign | -0.904 | Destabilizing | 0.894 | D | 0.465 | neutral | None | None | None | None | I |
L/V | 0.0731 | likely_benign | 0.0711 | benign | -0.585 | Destabilizing | 0.006 | N | 0.247 | neutral | N | 0.45119108 | None | None | I |
L/W | 0.2056 | likely_benign | 0.2072 | benign | -0.733 | Destabilizing | 0.995 | D | 0.631 | neutral | None | None | None | None | I |
L/Y | 0.2739 | likely_benign | 0.2918 | benign | -0.508 | Destabilizing | 0.945 | D | 0.548 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.