Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4963 | 15112;15113;15114 | chr2:178735559;178735558;178735557 | chr2:179600286;179600285;179600284 |
N2AB | 4646 | 14161;14162;14163 | chr2:178735559;178735558;178735557 | chr2:179600286;179600285;179600284 |
N2A | 3719 | 11380;11381;11382 | chr2:178735559;178735558;178735557 | chr2:179600286;179600285;179600284 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs754692297 | -0.462 | 0.966 | D | 0.46 | 0.413 | 0.480274617672 | gnomAD-2.1.1 | 4.11E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.44E-05 | None | 0 | 0 | 0 |
S/P | rs754692297 | -0.462 | 0.966 | D | 0.46 | 0.413 | 0.480274617672 | gnomAD-4.0.0 | 4.81869E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.39947E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0771 | likely_benign | 0.0828 | benign | -0.52 | Destabilizing | 0.022 | N | 0.139 | neutral | N | 0.506584706 | None | None | N |
S/C | 0.129 | likely_benign | 0.1464 | benign | -0.517 | Destabilizing | 0.998 | D | 0.477 | neutral | None | None | None | None | N |
S/D | 0.4128 | ambiguous | 0.525 | ambiguous | -0.989 | Destabilizing | 0.842 | D | 0.486 | neutral | None | None | None | None | N |
S/E | 0.4517 | ambiguous | 0.5324 | ambiguous | -1.046 | Destabilizing | 0.842 | D | 0.443 | neutral | None | None | None | None | N |
S/F | 0.1467 | likely_benign | 0.1703 | benign | -1.256 | Destabilizing | 0.974 | D | 0.585 | neutral | None | None | None | None | N |
S/G | 0.1067 | likely_benign | 0.1271 | benign | -0.631 | Destabilizing | 0.525 | D | 0.399 | neutral | None | None | None | None | N |
S/H | 0.3165 | likely_benign | 0.3689 | ambiguous | -1.303 | Destabilizing | 0.998 | D | 0.477 | neutral | None | None | None | None | N |
S/I | 0.16 | likely_benign | 0.1902 | benign | -0.34 | Destabilizing | 0.949 | D | 0.561 | neutral | None | None | None | None | N |
S/K | 0.5548 | ambiguous | 0.6373 | pathogenic | -0.511 | Destabilizing | 0.842 | D | 0.438 | neutral | None | None | None | None | N |
S/L | 0.0944 | likely_benign | 0.105 | benign | -0.34 | Destabilizing | 0.669 | D | 0.547 | neutral | D | 0.528796776 | None | None | N |
S/M | 0.2045 | likely_benign | 0.2279 | benign | 0.173 | Stabilizing | 0.991 | D | 0.482 | neutral | None | None | None | None | N |
S/N | 0.1462 | likely_benign | 0.1868 | benign | -0.521 | Destabilizing | 0.842 | D | 0.505 | neutral | None | None | None | None | N |
S/P | 0.863 | likely_pathogenic | 0.9142 | pathogenic | -0.375 | Destabilizing | 0.966 | D | 0.46 | neutral | D | 0.667477474 | None | None | N |
S/Q | 0.4214 | ambiguous | 0.4841 | ambiguous | -0.921 | Destabilizing | 0.974 | D | 0.499 | neutral | None | None | None | None | N |
S/R | 0.4326 | ambiguous | 0.5107 | ambiguous | -0.262 | Destabilizing | 0.949 | D | 0.471 | neutral | None | None | None | None | N |
S/T | 0.0775 | likely_benign | 0.0833 | benign | -0.481 | Destabilizing | 0.022 | N | 0.13 | neutral | N | 0.468752858 | None | None | N |
S/V | 0.1571 | likely_benign | 0.1819 | benign | -0.375 | Destabilizing | 0.728 | D | 0.55 | neutral | None | None | None | None | N |
S/W | 0.2957 | likely_benign | 0.3311 | benign | -1.262 | Destabilizing | 0.998 | D | 0.651 | neutral | None | None | None | None | N |
S/Y | 0.1731 | likely_benign | 0.2003 | benign | -0.924 | Destabilizing | 0.991 | D | 0.576 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.