Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4967 | 15124;15125;15126 | chr2:178735547;178735546;178735545 | chr2:179600274;179600273;179600272 |
N2AB | 4650 | 14173;14174;14175 | chr2:178735547;178735546;178735545 | chr2:179600274;179600273;179600272 |
N2A | 3723 | 11392;11393;11394 | chr2:178735547;178735546;178735545 | chr2:179600274;179600273;179600272 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | None | None | 1.0 | D | 0.744 | 0.713 | 0.576708290288 | gnomAD-4.0.0 | 1.62461E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.08356E-05 |
G/R | rs267599070 | 0.107 | 1.0 | D | 0.847 | 0.738 | 0.870683688638 | gnomAD-2.1.1 | 4.21E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.17E-06 | 0 |
G/R | rs267599070 | 0.107 | 1.0 | D | 0.847 | 0.738 | 0.870683688638 | gnomAD-4.0.0 | 3.24923E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.79811E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4323 | ambiguous | 0.5169 | ambiguous | -0.127 | Destabilizing | 1.0 | D | 0.744 | deleterious | D | 0.774420591 | None | None | I |
G/C | 0.748 | likely_pathogenic | 0.821 | pathogenic | -0.771 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
G/D | 0.6965 | likely_pathogenic | 0.7574 | pathogenic | -0.307 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
G/E | 0.7451 | likely_pathogenic | 0.8137 | pathogenic | -0.474 | Destabilizing | 1.0 | D | 0.823 | deleterious | D | 0.769205323 | None | None | I |
G/F | 0.9242 | likely_pathogenic | 0.9437 | pathogenic | -0.974 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
G/H | 0.8869 | likely_pathogenic | 0.9226 | pathogenic | -0.376 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
G/I | 0.8757 | likely_pathogenic | 0.9097 | pathogenic | -0.383 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
G/K | 0.8743 | likely_pathogenic | 0.9084 | pathogenic | -0.424 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
G/L | 0.8824 | likely_pathogenic | 0.9185 | pathogenic | -0.383 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
G/M | 0.9124 | likely_pathogenic | 0.9392 | pathogenic | -0.387 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | I |
G/N | 0.7715 | likely_pathogenic | 0.8346 | pathogenic | -0.145 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
G/P | 0.9921 | likely_pathogenic | 0.9936 | pathogenic | -0.27 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
G/Q | 0.8054 | likely_pathogenic | 0.8629 | pathogenic | -0.417 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
G/R | 0.7433 | likely_pathogenic | 0.8045 | pathogenic | -0.083 | Destabilizing | 1.0 | D | 0.847 | deleterious | D | 0.789021906 | None | None | I |
G/S | 0.3034 | likely_benign | 0.3728 | ambiguous | -0.278 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
G/T | 0.6922 | likely_pathogenic | 0.7463 | pathogenic | -0.378 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
G/V | 0.7828 | likely_pathogenic | 0.8383 | pathogenic | -0.27 | Destabilizing | 1.0 | D | 0.817 | deleterious | D | 0.842548789 | None | None | I |
G/W | 0.8885 | likely_pathogenic | 0.9125 | pathogenic | -1.103 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
G/Y | 0.8853 | likely_pathogenic | 0.9116 | pathogenic | -0.747 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.