Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4969 | 15130;15131;15132 | chr2:178735541;178735540;178735539 | chr2:179600268;179600267;179600266 |
N2AB | 4652 | 14179;14180;14181 | chr2:178735541;178735540;178735539 | chr2:179600268;179600267;179600266 |
N2A | 3725 | 11398;11399;11400 | chr2:178735541;178735540;178735539 | chr2:179600268;179600267;179600266 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.98 | D | 0.551 | 0.307 | 0.296679040009 | gnomAD-4.0.0 | 1.63519E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.51616E-05 | 0 |
S/N | rs762810073 | -0.381 | 0.99 | N | 0.591 | 0.302 | 0.280987212366 | gnomAD-2.1.1 | 8.54E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.84E-05 | None | 0 | None | 0 | 9.28E-06 | 0 |
S/N | rs762810073 | -0.381 | 0.99 | N | 0.591 | 0.302 | 0.280987212366 | gnomAD-4.0.0 | 1.63777E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.91795E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0778 | likely_benign | 0.0839 | benign | -0.936 | Destabilizing | 0.469 | N | 0.279 | neutral | None | None | None | None | N |
S/C | 0.1144 | likely_benign | 0.1272 | benign | -0.475 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | D | 0.577622495 | None | None | N |
S/D | 0.291 | likely_benign | 0.3547 | ambiguous | 0.047 | Stabilizing | 0.971 | D | 0.541 | neutral | None | None | None | None | N |
S/E | 0.5038 | ambiguous | 0.5791 | pathogenic | 0.016 | Stabilizing | 0.469 | N | 0.383 | neutral | None | None | None | None | N |
S/F | 0.1792 | likely_benign | 0.2128 | benign | -1.263 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
S/G | 0.1149 | likely_benign | 0.1303 | benign | -1.142 | Destabilizing | 0.98 | D | 0.551 | neutral | D | 0.576684026 | None | None | N |
S/H | 0.3493 | ambiguous | 0.3991 | ambiguous | -1.597 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
S/I | 0.1615 | likely_benign | 0.1987 | benign | -0.495 | Destabilizing | 0.997 | D | 0.745 | deleterious | N | 0.499167265 | None | None | N |
S/K | 0.6863 | likely_pathogenic | 0.7551 | pathogenic | -0.612 | Destabilizing | 0.985 | D | 0.545 | neutral | None | None | None | None | N |
S/L | 0.1092 | likely_benign | 0.1297 | benign | -0.495 | Destabilizing | 0.985 | D | 0.683 | prob.neutral | None | None | None | None | N |
S/M | 0.2528 | likely_benign | 0.305 | benign | -0.074 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
S/N | 0.1582 | likely_benign | 0.188 | benign | -0.426 | Destabilizing | 0.99 | D | 0.591 | neutral | N | 0.509023002 | None | None | N |
S/P | 0.8265 | likely_pathogenic | 0.8738 | pathogenic | -0.611 | Destabilizing | 0.998 | D | 0.711 | prob.delet. | None | None | None | None | N |
S/Q | 0.528 | ambiguous | 0.583 | pathogenic | -0.643 | Destabilizing | 0.996 | D | 0.586 | neutral | None | None | None | None | N |
S/R | 0.557 | ambiguous | 0.6153 | pathogenic | -0.469 | Destabilizing | 0.994 | D | 0.713 | prob.delet. | N | 0.503970995 | None | None | N |
S/T | 0.0922 | likely_benign | 0.1041 | benign | -0.562 | Destabilizing | 0.98 | D | 0.559 | neutral | N | 0.485524716 | None | None | N |
S/V | 0.1604 | likely_benign | 0.192 | benign | -0.611 | Destabilizing | 0.985 | D | 0.687 | prob.neutral | None | None | None | None | N |
S/W | 0.3786 | ambiguous | 0.4143 | ambiguous | -1.16 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
S/Y | 0.1803 | likely_benign | 0.2063 | benign | -0.929 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.