Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4972 | 15139;15140;15141 | chr2:178735532;178735531;178735530 | chr2:179600259;179600258;179600257 |
N2AB | 4655 | 14188;14189;14190 | chr2:178735532;178735531;178735530 | chr2:179600259;179600258;179600257 |
N2A | 3728 | 11407;11408;11409 | chr2:178735532;178735531;178735530 | chr2:179600259;179600258;179600257 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs868769069 | None | 0.193 | N | 0.611 | 0.322 | 0.522023262976 | gnomAD-4.0.0 | 6.94348E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.06462E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0781 | likely_benign | 0.0849 | benign | -0.473 | Destabilizing | 0.006 | N | 0.233 | neutral | N | 0.399468892 | None | None | N |
S/C | 0.1258 | likely_benign | 0.1234 | benign | -0.315 | Destabilizing | 0.944 | D | 0.559 | neutral | None | None | None | None | N |
S/D | 0.3121 | likely_benign | 0.415 | ambiguous | -0.072 | Destabilizing | 0.241 | N | 0.52 | neutral | None | None | None | None | N |
S/E | 0.3537 | ambiguous | 0.4449 | ambiguous | -0.148 | Destabilizing | 0.008 | N | 0.221 | neutral | None | None | None | None | N |
S/F | 0.1247 | likely_benign | 0.131 | benign | -0.906 | Destabilizing | 0.818 | D | 0.639 | neutral | None | None | None | None | N |
S/G | 0.1028 | likely_benign | 0.1212 | benign | -0.629 | Destabilizing | 0.388 | N | 0.506 | neutral | None | None | None | None | N |
S/H | 0.2564 | likely_benign | 0.3025 | benign | -1.174 | Destabilizing | 0.981 | D | 0.575 | neutral | None | None | None | None | N |
S/I | 0.1349 | likely_benign | 0.1581 | benign | -0.183 | Destabilizing | 0.527 | D | 0.655 | neutral | None | None | None | None | N |
S/K | 0.4228 | ambiguous | 0.5228 | ambiguous | -0.626 | Destabilizing | 0.388 | N | 0.511 | neutral | None | None | None | None | N |
S/L | 0.0755 | likely_benign | 0.0791 | benign | -0.183 | Destabilizing | 0.193 | N | 0.611 | neutral | N | 0.505785461 | None | None | N |
S/M | 0.1744 | likely_benign | 0.198 | benign | 0.131 | Stabilizing | 0.944 | D | 0.561 | neutral | None | None | None | None | N |
S/N | 0.1287 | likely_benign | 0.1589 | benign | -0.342 | Destabilizing | 0.388 | N | 0.561 | neutral | None | None | None | None | N |
S/P | 0.2357 | likely_benign | 0.3009 | benign | -0.249 | Destabilizing | 0.773 | D | 0.596 | neutral | N | 0.514833547 | None | None | N |
S/Q | 0.3566 | ambiguous | 0.4281 | ambiguous | -0.619 | Destabilizing | 0.69 | D | 0.56 | neutral | None | None | None | None | N |
S/R | 0.3414 | ambiguous | 0.4184 | ambiguous | -0.413 | Destabilizing | 0.69 | D | 0.595 | neutral | None | None | None | None | N |
S/T | 0.0748 | likely_benign | 0.0841 | benign | -0.435 | Destabilizing | 0.001 | N | 0.304 | neutral | N | 0.402405881 | None | None | N |
S/V | 0.1424 | likely_benign | 0.1642 | benign | -0.249 | Destabilizing | 0.241 | N | 0.623 | neutral | None | None | None | None | N |
S/W | 0.2649 | likely_benign | 0.2812 | benign | -0.877 | Destabilizing | 0.981 | D | 0.647 | neutral | None | None | None | None | N |
S/Y | 0.1416 | likely_benign | 0.1493 | benign | -0.621 | Destabilizing | 0.818 | D | 0.641 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.