Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4973 | 15142;15143;15144 | chr2:178735529;178735528;178735527 | chr2:179600256;179600255;179600254 |
N2AB | 4656 | 14191;14192;14193 | chr2:178735529;178735528;178735527 | chr2:179600256;179600255;179600254 |
N2A | 3729 | 11410;11411;11412 | chr2:178735529;178735528;178735527 | chr2:179600256;179600255;179600254 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.014 | D | 0.452 | 0.135 | 0.137902524267 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.482 | ambiguous | 0.5598 | ambiguous | -1.062 | Destabilizing | 0.998 | D | 0.682 | prob.neutral | None | None | None | None | N |
A/D | 0.556 | ambiguous | 0.645 | pathogenic | -1.215 | Destabilizing | 0.942 | D | 0.785 | deleterious | D | 0.7699434000000001 | None | None | N |
A/E | 0.5543 | ambiguous | 0.6631 | pathogenic | -1.199 | Destabilizing | 0.956 | D | 0.783 | deleterious | None | None | None | None | N |
A/F | 0.5618 | ambiguous | 0.687 | pathogenic | -0.983 | Destabilizing | 0.956 | D | 0.795 | deleterious | None | None | None | None | N |
A/G | 0.1373 | likely_benign | 0.1475 | benign | -1.284 | Destabilizing | 0.698 | D | 0.585 | neutral | D | 0.52321945 | None | None | N |
A/H | 0.7519 | likely_pathogenic | 0.8203 | pathogenic | -1.483 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
A/I | 0.3202 | likely_benign | 0.4766 | ambiguous | -0.242 | Destabilizing | 0.915 | D | 0.784 | deleterious | None | None | None | None | N |
A/K | 0.714 | likely_pathogenic | 0.797 | pathogenic | -1.163 | Destabilizing | 0.86 | D | 0.768 | deleterious | None | None | None | None | N |
A/L | 0.2972 | likely_benign | 0.4206 | ambiguous | -0.242 | Destabilizing | 0.514 | D | 0.687 | prob.neutral | None | None | None | None | N |
A/M | 0.3072 | likely_benign | 0.4121 | ambiguous | -0.282 | Destabilizing | 0.559 | D | 0.669 | neutral | None | None | None | None | N |
A/N | 0.4477 | ambiguous | 0.5621 | ambiguous | -0.984 | Destabilizing | 0.956 | D | 0.783 | deleterious | None | None | None | None | N |
A/P | 0.8712 | likely_pathogenic | 0.9193 | pathogenic | -0.441 | Destabilizing | 0.97 | D | 0.788 | deleterious | D | 0.733867162 | None | None | N |
A/Q | 0.6254 | likely_pathogenic | 0.7071 | pathogenic | -1.07 | Destabilizing | 0.978 | D | 0.799 | deleterious | None | None | None | None | N |
A/R | 0.6604 | likely_pathogenic | 0.7398 | pathogenic | -0.936 | Destabilizing | 0.956 | D | 0.795 | deleterious | None | None | None | None | N |
A/S | 0.0999 | likely_benign | 0.1051 | benign | -1.415 | Destabilizing | 0.058 | N | 0.308 | neutral | D | 0.590506967 | None | None | N |
A/T | 0.0835 | likely_benign | 0.0977 | benign | -1.289 | Destabilizing | 0.014 | N | 0.452 | neutral | D | 0.566074726 | None | None | N |
A/V | 0.1539 | likely_benign | 0.2147 | benign | -0.441 | Destabilizing | 0.698 | D | 0.599 | neutral | N | 0.51480646 | None | None | N |
A/W | 0.9024 | likely_pathogenic | 0.9405 | pathogenic | -1.387 | Destabilizing | 0.998 | D | 0.833 | deleterious | None | None | None | None | N |
A/Y | 0.7014 | likely_pathogenic | 0.7949 | pathogenic | -0.94 | Destabilizing | 0.978 | D | 0.818 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.