Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4975 | 15148;15149;15150 | chr2:178735523;178735522;178735521 | chr2:179600250;179600249;179600248 |
N2AB | 4658 | 14197;14198;14199 | chr2:178735523;178735522;178735521 | chr2:179600250;179600249;179600248 |
N2A | 3731 | 11416;11417;11418 | chr2:178735523;178735522;178735521 | chr2:179600250;179600249;179600248 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | rs2081290563 | None | 1.0 | D | 0.871 | 0.593 | 0.841324563227 | gnomAD-4.0.0 | 1.67158E-06 | None | None | None | None | N | None | 6.222E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4862 | ambiguous | 0.5724 | pathogenic | -1.963 | Destabilizing | 0.999 | D | 0.634 | neutral | D | 0.703761902 | None | None | N |
V/C | 0.8825 | likely_pathogenic | 0.9099 | pathogenic | -1.949 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
V/D | 0.9813 | likely_pathogenic | 0.988 | pathogenic | -1.748 | Destabilizing | 1.0 | D | 0.871 | deleterious | D | 0.739674177 | None | None | N |
V/E | 0.9444 | likely_pathogenic | 0.9595 | pathogenic | -1.608 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/F | 0.3361 | likely_benign | 0.3911 | ambiguous | -1.34 | Destabilizing | 1.0 | D | 0.84 | deleterious | D | 0.652624752 | None | None | N |
V/G | 0.7412 | likely_pathogenic | 0.8129 | pathogenic | -2.433 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.739674177 | None | None | N |
V/H | 0.9759 | likely_pathogenic | 0.9836 | pathogenic | -1.965 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
V/I | 0.0782 | likely_benign | 0.08 | benign | -0.698 | Destabilizing | 0.997 | D | 0.547 | neutral | D | 0.554723073 | None | None | N |
V/K | 0.9641 | likely_pathogenic | 0.9734 | pathogenic | -1.539 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/L | 0.1726 | likely_benign | 0.2025 | benign | -0.698 | Destabilizing | 0.997 | D | 0.645 | neutral | N | 0.320561457 | None | None | N |
V/M | 0.1956 | likely_benign | 0.2198 | benign | -0.882 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
V/N | 0.9328 | likely_pathogenic | 0.9549 | pathogenic | -1.65 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/P | 0.9737 | likely_pathogenic | 0.9833 | pathogenic | -1.088 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/Q | 0.9432 | likely_pathogenic | 0.9591 | pathogenic | -1.615 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
V/R | 0.9477 | likely_pathogenic | 0.9614 | pathogenic | -1.268 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
V/S | 0.8173 | likely_pathogenic | 0.8732 | pathogenic | -2.41 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
V/T | 0.6498 | likely_pathogenic | 0.729 | pathogenic | -2.118 | Highly Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
V/W | 0.9627 | likely_pathogenic | 0.9743 | pathogenic | -1.601 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
V/Y | 0.8788 | likely_pathogenic | 0.9122 | pathogenic | -1.272 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.