Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4976 | 15151;15152;15153 | chr2:178735520;178735519;178735518 | chr2:179600247;179600246;179600245 |
N2AB | 4659 | 14200;14201;14202 | chr2:178735520;178735519;178735518 | chr2:179600247;179600246;179600245 |
N2A | 3732 | 11419;11420;11421 | chr2:178735520;178735519;178735518 | chr2:179600247;179600246;179600245 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.188 | N | 0.398 | 0.254 | 0.0884992946249 | gnomAD-4.0.0 | 7.01756E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.11057E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.074 | likely_benign | 0.0797 | benign | -0.713 | Destabilizing | None | N | 0.142 | neutral | N | 0.50517243 | None | None | N |
T/C | 0.3598 | ambiguous | 0.3992 | ambiguous | -0.429 | Destabilizing | 0.824 | D | 0.417 | neutral | None | None | None | None | N |
T/D | 0.2685 | likely_benign | 0.3265 | benign | 0.003 | Stabilizing | 0.081 | N | 0.395 | neutral | None | None | None | None | N |
T/E | 0.232 | likely_benign | 0.2762 | benign | -0.046 | Destabilizing | 0.002 | N | 0.281 | neutral | None | None | None | None | N |
T/F | 0.1484 | likely_benign | 0.1654 | benign | -1.053 | Destabilizing | 0.38 | N | 0.527 | neutral | None | None | None | None | N |
T/G | 0.22 | likely_benign | 0.2702 | benign | -0.889 | Destabilizing | 0.081 | N | 0.497 | neutral | None | None | None | None | N |
T/H | 0.1979 | likely_benign | 0.22 | benign | -1.262 | Destabilizing | 0.824 | D | 0.501 | neutral | None | None | None | None | N |
T/I | 0.1032 | likely_benign | 0.1185 | benign | -0.353 | Destabilizing | 0.188 | N | 0.398 | neutral | N | 0.474099539 | None | None | N |
T/K | 0.1958 | likely_benign | 0.2184 | benign | -0.483 | Destabilizing | 0.002 | N | 0.281 | neutral | None | None | None | None | N |
T/L | 0.0798 | likely_benign | 0.0895 | benign | -0.353 | Destabilizing | 0.035 | N | 0.415 | neutral | None | None | None | None | N |
T/M | 0.0771 | likely_benign | 0.0779 | benign | 0.025 | Stabilizing | 0.035 | N | 0.446 | neutral | None | None | None | None | N |
T/N | 0.0995 | likely_benign | 0.1133 | benign | -0.289 | Destabilizing | 0.062 | N | 0.375 | neutral | N | 0.510384599 | None | None | N |
T/P | 0.3059 | likely_benign | 0.3735 | ambiguous | -0.444 | Destabilizing | 0.317 | N | 0.409 | neutral | D | 0.655242522 | None | None | N |
T/Q | 0.2045 | likely_benign | 0.2242 | benign | -0.59 | Destabilizing | 0.38 | N | 0.404 | neutral | None | None | None | None | N |
T/R | 0.1541 | likely_benign | 0.1639 | benign | -0.226 | Destabilizing | 0.081 | N | 0.409 | neutral | None | None | None | None | N |
T/S | 0.0906 | likely_benign | 0.0984 | benign | -0.586 | Destabilizing | None | N | 0.247 | neutral | N | 0.50371934 | None | None | N |
T/V | 0.1 | likely_benign | 0.1142 | benign | -0.444 | Destabilizing | 0.081 | N | 0.344 | neutral | None | None | None | None | N |
T/W | 0.436 | ambiguous | 0.4819 | ambiguous | -0.944 | Destabilizing | 0.935 | D | 0.567 | neutral | None | None | None | None | N |
T/Y | 0.1987 | likely_benign | 0.2277 | benign | -0.698 | Destabilizing | 0.555 | D | 0.523 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.