Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4977 | 15154;15155;15156 | chr2:178735517;178735516;178735515 | chr2:179600244;179600243;179600242 |
N2AB | 4660 | 14203;14204;14205 | chr2:178735517;178735516;178735515 | chr2:179600244;179600243;179600242 |
N2A | 3733 | 11422;11423;11424 | chr2:178735517;178735516;178735515 | chr2:179600244;179600243;179600242 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.334 | D | 0.661 | 0.676 | 0.764842827521 | gnomAD-4.0.0 | 7.03072E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.12019E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5388 | ambiguous | 0.6124 | pathogenic | -1.441 | Destabilizing | 0.334 | N | 0.661 | neutral | D | 0.798283987 | None | None | I |
V/C | 0.868 | likely_pathogenic | 0.8882 | pathogenic | -1.468 | Destabilizing | 0.982 | D | 0.717 | prob.delet. | None | None | None | None | I |
V/D | 0.9651 | likely_pathogenic | 0.9752 | pathogenic | -1.742 | Destabilizing | 0.781 | D | 0.713 | prob.delet. | D | 0.797535789 | None | None | I |
V/E | 0.9225 | likely_pathogenic | 0.9413 | pathogenic | -1.755 | Destabilizing | 0.826 | D | 0.68 | prob.neutral | None | None | None | None | I |
V/F | 0.4186 | ambiguous | 0.4451 | ambiguous | -1.384 | Destabilizing | 0.638 | D | 0.704 | prob.neutral | D | 0.762959346 | None | None | I |
V/G | 0.7219 | likely_pathogenic | 0.7879 | pathogenic | -1.71 | Destabilizing | 0.781 | D | 0.689 | prob.neutral | D | 0.797535789 | None | None | I |
V/H | 0.9646 | likely_pathogenic | 0.9746 | pathogenic | -1.189 | Destabilizing | 0.982 | D | 0.732 | prob.delet. | None | None | None | None | I |
V/I | 0.0644 | likely_benign | 0.0638 | benign | -0.8 | Destabilizing | 0.002 | N | 0.506 | neutral | D | 0.586427915 | None | None | I |
V/K | 0.948 | likely_pathogenic | 0.9628 | pathogenic | -1.091 | Destabilizing | 0.826 | D | 0.679 | prob.neutral | None | None | None | None | I |
V/L | 0.2288 | likely_benign | 0.2482 | benign | -0.8 | Destabilizing | 0.034 | N | 0.671 | neutral | D | 0.698486935 | None | None | I |
V/M | 0.2406 | likely_benign | 0.2645 | benign | -0.768 | Destabilizing | 0.7 | D | 0.733 | prob.delet. | None | None | None | None | I |
V/N | 0.8497 | likely_pathogenic | 0.8921 | pathogenic | -1.026 | Destabilizing | 0.935 | D | 0.723 | prob.delet. | None | None | None | None | I |
V/P | 0.896 | likely_pathogenic | 0.9224 | pathogenic | -0.982 | Destabilizing | 0.935 | D | 0.687 | prob.neutral | None | None | None | None | I |
V/Q | 0.9093 | likely_pathogenic | 0.9339 | pathogenic | -1.286 | Destabilizing | 0.935 | D | 0.7 | prob.neutral | None | None | None | None | I |
V/R | 0.9203 | likely_pathogenic | 0.9426 | pathogenic | -0.589 | Destabilizing | 0.826 | D | 0.723 | prob.delet. | None | None | None | None | I |
V/S | 0.7121 | likely_pathogenic | 0.7809 | pathogenic | -1.529 | Destabilizing | 0.826 | D | 0.664 | neutral | None | None | None | None | I |
V/T | 0.5866 | likely_pathogenic | 0.6614 | pathogenic | -1.437 | Destabilizing | 0.399 | N | 0.695 | prob.neutral | None | None | None | None | I |
V/W | 0.9655 | likely_pathogenic | 0.9713 | pathogenic | -1.504 | Destabilizing | 0.982 | D | 0.697 | prob.neutral | None | None | None | None | I |
V/Y | 0.8908 | likely_pathogenic | 0.9089 | pathogenic | -1.17 | Destabilizing | 0.826 | D | 0.71 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.