Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4981 | 15166;15167;15168 | chr2:178734983;178734982;178734981 | chr2:179599710;179599709;179599708 |
N2AB | 4664 | 14215;14216;14217 | chr2:178734983;178734982;178734981 | chr2:179599710;179599709;179599708 |
N2A | 3737 | 11434;11435;11436 | chr2:178734983;178734982;178734981 | chr2:179599710;179599709;179599708 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1305431573 | None | 1.0 | D | 0.792 | 0.752 | 0.657814710005 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/S | rs1305431573 | None | 1.0 | D | 0.792 | 0.752 | 0.657814710005 | gnomAD-4.0.0 | 6.57246E-06 | None | None | None | None | N | None | 2.41336E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.66 | likely_pathogenic | 0.6461 | pathogenic | -1.624 | Destabilizing | 1.0 | D | 0.751 | deleterious | D | 0.645912217 | None | None | N |
P/C | 0.981 | likely_pathogenic | 0.9802 | pathogenic | -1.421 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
P/D | 0.9988 | likely_pathogenic | 0.999 | pathogenic | -1.372 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
P/E | 0.9963 | likely_pathogenic | 0.9967 | pathogenic | -1.355 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
P/F | 0.997 | likely_pathogenic | 0.9973 | pathogenic | -1.302 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
P/G | 0.9859 | likely_pathogenic | 0.986 | pathogenic | -1.951 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
P/H | 0.9941 | likely_pathogenic | 0.9947 | pathogenic | -1.417 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
P/I | 0.9219 | likely_pathogenic | 0.936 | pathogenic | -0.818 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
P/K | 0.997 | likely_pathogenic | 0.9973 | pathogenic | -1.229 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
P/L | 0.8388 | likely_pathogenic | 0.841 | pathogenic | -0.818 | Destabilizing | 1.0 | D | 0.807 | deleterious | D | 0.777698825 | None | None | N |
P/M | 0.9797 | likely_pathogenic | 0.9839 | pathogenic | -0.789 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
P/N | 0.9975 | likely_pathogenic | 0.9978 | pathogenic | -1.098 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
P/Q | 0.9901 | likely_pathogenic | 0.9915 | pathogenic | -1.27 | Destabilizing | 1.0 | D | 0.807 | deleterious | D | 0.777184053 | None | None | N |
P/R | 0.989 | likely_pathogenic | 0.9894 | pathogenic | -0.768 | Destabilizing | 1.0 | D | 0.818 | deleterious | D | 0.777184053 | None | None | N |
P/S | 0.9531 | likely_pathogenic | 0.9558 | pathogenic | -1.711 | Destabilizing | 1.0 | D | 0.792 | deleterious | D | 0.77799905 | None | None | N |
P/T | 0.9282 | likely_pathogenic | 0.9372 | pathogenic | -1.577 | Destabilizing | 1.0 | D | 0.783 | deleterious | D | 0.777698825 | None | None | N |
P/V | 0.816 | likely_pathogenic | 0.8482 | pathogenic | -1.053 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
P/W | 0.9994 | likely_pathogenic | 0.9995 | pathogenic | -1.438 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
P/Y | 0.9982 | likely_pathogenic | 0.9984 | pathogenic | -1.139 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.