Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4982 | 15169;15170;15171 | chr2:178734980;178734979;178734978 | chr2:179599707;179599706;179599705 |
N2AB | 4665 | 14218;14219;14220 | chr2:178734980;178734979;178734978 | chr2:179599707;179599706;179599705 |
N2A | 3738 | 11437;11438;11439 | chr2:178734980;178734979;178734978 | chr2:179599707;179599706;179599705 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs775173260 | 0.122 | None | N | 0.165 | 0.049 | 0.0297737177859 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/T | rs775173260 | 0.122 | None | N | 0.165 | 0.049 | 0.0297737177859 | gnomAD-4.0.0 | 6.5697E-06 | None | None | None | None | N | None | 2.41208E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0611 | likely_benign | 0.061 | benign | -0.49 | Destabilizing | None | N | 0.134 | neutral | N | 0.450492574 | None | None | N |
S/C | 0.1111 | likely_benign | 0.1109 | benign | -0.358 | Destabilizing | None | N | 0.214 | neutral | N | 0.49041911 | None | None | N |
S/D | 0.6399 | likely_pathogenic | 0.6558 | pathogenic | 0.489 | Stabilizing | 0.072 | N | 0.287 | neutral | None | None | None | None | N |
S/E | 0.6476 | likely_pathogenic | 0.6576 | pathogenic | 0.481 | Stabilizing | 0.072 | N | 0.258 | neutral | None | None | None | None | N |
S/F | 0.1585 | likely_benign | 0.1627 | benign | -0.761 | Destabilizing | 0.295 | N | 0.435 | neutral | N | 0.448318746 | None | None | N |
S/G | 0.1205 | likely_benign | 0.1255 | benign | -0.713 | Destabilizing | 0.016 | N | 0.281 | neutral | None | None | None | None | N |
S/H | 0.4053 | ambiguous | 0.4166 | ambiguous | -1.041 | Destabilizing | 0.864 | D | 0.347 | neutral | None | None | None | None | N |
S/I | 0.1285 | likely_benign | 0.1319 | benign | -0.014 | Destabilizing | 0.038 | N | 0.355 | neutral | None | None | None | None | N |
S/K | 0.7617 | likely_pathogenic | 0.758 | pathogenic | -0.301 | Destabilizing | 0.072 | N | 0.257 | neutral | None | None | None | None | N |
S/L | 0.0821 | likely_benign | 0.0827 | benign | -0.014 | Destabilizing | 0.016 | N | 0.335 | neutral | None | None | None | None | N |
S/M | 0.1625 | likely_benign | 0.1739 | benign | -0.022 | Destabilizing | 0.356 | N | 0.338 | neutral | None | None | None | None | N |
S/N | 0.2034 | likely_benign | 0.2211 | benign | -0.262 | Destabilizing | 0.136 | N | 0.363 | neutral | None | None | None | None | N |
S/P | 0.856 | likely_pathogenic | 0.8191 | pathogenic | -0.139 | Destabilizing | 0.055 | N | 0.385 | neutral | N | 0.452207144 | None | None | N |
S/Q | 0.5254 | ambiguous | 0.5326 | ambiguous | -0.341 | Destabilizing | 0.356 | N | 0.372 | neutral | None | None | None | None | N |
S/R | 0.6609 | likely_pathogenic | 0.6598 | pathogenic | -0.237 | Destabilizing | 0.214 | N | 0.396 | neutral | None | None | None | None | N |
S/T | 0.0706 | likely_benign | 0.0747 | benign | -0.334 | Destabilizing | None | N | 0.165 | neutral | N | 0.43071254 | None | None | N |
S/V | 0.108 | likely_benign | 0.1122 | benign | -0.139 | Destabilizing | 0.001 | N | 0.358 | neutral | None | None | None | None | N |
S/W | 0.4075 | ambiguous | 0.3954 | ambiguous | -0.767 | Destabilizing | 0.864 | D | 0.497 | neutral | None | None | None | None | N |
S/Y | 0.1828 | likely_benign | 0.1819 | benign | -0.458 | Destabilizing | 0.295 | N | 0.429 | neutral | N | 0.450707291 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.