Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4988 | 15187;15188;15189 | chr2:178734962;178734961;178734960 | chr2:179599689;179599688;179599687 |
N2AB | 4671 | 14236;14237;14238 | chr2:178734962;178734961;178734960 | chr2:179599689;179599688;179599687 |
N2A | 3744 | 11455;11456;11457 | chr2:178734962;178734961;178734960 | chr2:179599689;179599688;179599687 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.011 | N | 0.164 | 0.079 | 0.0401082797425 | gnomAD-4.0.0 | 1.63507E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.94125E-06 | 0 | 0 |
D/G | rs1029051488 | None | 0.896 | N | 0.474 | 0.232 | 0.124217242631 | gnomAD-4.0.0 | 6.24316E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.27262E-06 | 0 | 1.67583E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2414 | likely_benign | 0.3149 | benign | -0.38 | Destabilizing | 0.896 | D | 0.491 | neutral | N | 0.443401906 | None | None | N |
D/C | 0.8443 | likely_pathogenic | 0.8973 | pathogenic | -0.165 | Destabilizing | 0.999 | D | 0.668 | neutral | None | None | None | None | N |
D/E | 0.1327 | likely_benign | 0.1844 | benign | -0.278 | Destabilizing | 0.011 | N | 0.164 | neutral | N | 0.337163959 | None | None | N |
D/F | 0.6457 | likely_pathogenic | 0.7285 | pathogenic | 0.005 | Stabilizing | 0.996 | D | 0.614 | neutral | None | None | None | None | N |
D/G | 0.3283 | likely_benign | 0.4461 | ambiguous | -0.637 | Destabilizing | 0.896 | D | 0.474 | neutral | N | 0.441829516 | None | None | N |
D/H | 0.4872 | ambiguous | 0.6013 | pathogenic | 0.16 | Stabilizing | 0.984 | D | 0.529 | neutral | N | 0.442923682 | None | None | N |
D/I | 0.4265 | ambiguous | 0.5257 | ambiguous | 0.271 | Stabilizing | 0.988 | D | 0.611 | neutral | None | None | None | None | N |
D/K | 0.5782 | likely_pathogenic | 0.6975 | pathogenic | 0.147 | Stabilizing | 0.851 | D | 0.462 | neutral | None | None | None | None | N |
D/L | 0.4305 | ambiguous | 0.5161 | ambiguous | 0.271 | Stabilizing | 0.976 | D | 0.59 | neutral | None | None | None | None | N |
D/M | 0.6572 | likely_pathogenic | 0.75 | pathogenic | 0.363 | Stabilizing | 0.999 | D | 0.616 | neutral | None | None | None | None | N |
D/N | 0.1712 | likely_benign | 0.2221 | benign | -0.333 | Destabilizing | 0.103 | N | 0.233 | neutral | N | 0.433267329 | None | None | N |
D/P | 0.5938 | likely_pathogenic | 0.7389 | pathogenic | 0.077 | Stabilizing | 0.988 | D | 0.534 | neutral | None | None | None | None | N |
D/Q | 0.4487 | ambiguous | 0.5853 | pathogenic | -0.239 | Destabilizing | 0.851 | D | 0.491 | neutral | None | None | None | None | N |
D/R | 0.6545 | likely_pathogenic | 0.7524 | pathogenic | 0.433 | Stabilizing | 0.976 | D | 0.546 | neutral | None | None | None | None | N |
D/S | 0.1808 | likely_benign | 0.2374 | benign | -0.467 | Destabilizing | 0.919 | D | 0.493 | neutral | None | None | None | None | N |
D/T | 0.355 | ambiguous | 0.4606 | ambiguous | -0.253 | Destabilizing | 0.919 | D | 0.497 | neutral | None | None | None | None | N |
D/V | 0.2801 | likely_benign | 0.3534 | ambiguous | 0.077 | Stabilizing | 0.984 | D | 0.591 | neutral | N | 0.434724487 | None | None | N |
D/W | 0.9457 | likely_pathogenic | 0.9632 | pathogenic | 0.229 | Stabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
D/Y | 0.359 | ambiguous | 0.4312 | ambiguous | 0.265 | Stabilizing | 0.995 | D | 0.616 | neutral | N | 0.451946431 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.