Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4996 | 15211;15212;15213 | chr2:178734938;178734937;178734936 | chr2:179599665;179599664;179599663 |
N2AB | 4679 | 14260;14261;14262 | chr2:178734938;178734937;178734936 | chr2:179599665;179599664;179599663 |
N2A | 3752 | 11479;11480;11481 | chr2:178734938;178734937;178734936 | chr2:179599665;179599664;179599663 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | None | None | 1.0 | D | 0.864 | 0.715 | 0.62430428174 | gnomAD-4.0.0 | 1.60299E-06 | None | None | None | None | I | None | 0 | 2.32992E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4281 | ambiguous | 0.4774 | ambiguous | -0.5 | Destabilizing | 1.0 | D | 0.788 | deleterious | D | 0.737783881 | None | None | I |
G/C | 0.6962 | likely_pathogenic | 0.739 | pathogenic | -0.983 | Destabilizing | 1.0 | D | 0.831 | deleterious | D | 0.80765844 | None | None | I |
G/D | 0.5289 | ambiguous | 0.5732 | pathogenic | -0.871 | Destabilizing | 1.0 | D | 0.864 | deleterious | D | 0.666012736 | None | None | I |
G/E | 0.4914 | ambiguous | 0.5376 | ambiguous | -1.028 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
G/F | 0.9029 | likely_pathogenic | 0.9226 | pathogenic | -1.168 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
G/H | 0.6907 | likely_pathogenic | 0.713 | pathogenic | -0.773 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
G/I | 0.9292 | likely_pathogenic | 0.9493 | pathogenic | -0.576 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
G/K | 0.6145 | likely_pathogenic | 0.6502 | pathogenic | -1.056 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | I |
G/L | 0.8296 | likely_pathogenic | 0.8674 | pathogenic | -0.576 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
G/M | 0.8538 | likely_pathogenic | 0.8852 | pathogenic | -0.516 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
G/N | 0.547 | ambiguous | 0.5671 | pathogenic | -0.72 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
G/P | 0.9896 | likely_pathogenic | 0.993 | pathogenic | -0.517 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
G/Q | 0.5447 | ambiguous | 0.5797 | pathogenic | -1.029 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
G/R | 0.4686 | ambiguous | 0.5061 | ambiguous | -0.558 | Destabilizing | 1.0 | D | 0.864 | deleterious | D | 0.752979017 | None | None | I |
G/S | 0.2476 | likely_benign | 0.2654 | benign | -0.856 | Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.643841198 | None | None | I |
G/T | 0.5714 | likely_pathogenic | 0.6009 | pathogenic | -0.948 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
G/V | 0.8272 | likely_pathogenic | 0.8694 | pathogenic | -0.517 | Destabilizing | 1.0 | D | 0.831 | deleterious | D | 0.752641877 | None | None | I |
G/W | 0.7958 | likely_pathogenic | 0.8205 | pathogenic | -1.32 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
G/Y | 0.8347 | likely_pathogenic | 0.8704 | pathogenic | -0.987 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.