Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4997 | 15214;15215;15216 | chr2:178734935;178734934;178734933 | chr2:179599662;179599661;179599660 |
N2AB | 4680 | 14263;14264;14265 | chr2:178734935;178734934;178734933 | chr2:179599662;179599661;179599660 |
N2A | 3753 | 11482;11483;11484 | chr2:178734935;178734934;178734933 | chr2:179599662;179599661;179599660 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.006 | N | 0.153 | 0.083 | 0.101711395817 | gnomAD-4.0.0 | 1.60003E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.79049E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs775749900 | -1.037 | 0.002 | N | 0.176 | 0.138 | 0.235664433957 | gnomAD-2.1.1 | 2.08E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.66456E-04 | None | 0 | 0 | 0 |
E/G | rs775749900 | -1.037 | 0.002 | N | 0.176 | 0.138 | 0.235664433957 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07125E-04 | 0 |
E/G | rs775749900 | -1.037 | 0.002 | N | 0.176 | 0.138 | 0.235664433957 | gnomAD-4.0.0 | 1.05588E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.87353E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3141 | likely_benign | 0.3419 | ambiguous | -0.693 | Destabilizing | 0.01 | N | 0.159 | neutral | N | 0.457706861 | None | None | I |
E/C | 0.9505 | likely_pathogenic | 0.9615 | pathogenic | -0.239 | Destabilizing | 0.995 | D | 0.325 | neutral | None | None | None | None | I |
E/D | 0.1595 | likely_benign | 0.1798 | benign | -0.729 | Destabilizing | 0.006 | N | 0.153 | neutral | N | 0.438837634 | None | None | I |
E/F | 0.8984 | likely_pathogenic | 0.9125 | pathogenic | -0.257 | Destabilizing | 0.893 | D | 0.385 | neutral | None | None | None | None | I |
E/G | 0.3185 | likely_benign | 0.3495 | ambiguous | -0.991 | Destabilizing | 0.002 | N | 0.176 | neutral | N | 0.458012485 | None | None | I |
E/H | 0.7162 | likely_pathogenic | 0.7573 | pathogenic | -0.267 | Destabilizing | 0.981 | D | 0.278 | neutral | None | None | None | None | I |
E/I | 0.707 | likely_pathogenic | 0.7261 | pathogenic | 0.096 | Stabilizing | 0.013 | N | 0.232 | neutral | None | None | None | None | I |
E/K | 0.306 | likely_benign | 0.3168 | benign | -0.018 | Destabilizing | 0.642 | D | 0.217 | neutral | N | 0.458083311 | None | None | I |
E/L | 0.7237 | likely_pathogenic | 0.751 | pathogenic | 0.096 | Stabilizing | 0.329 | N | 0.37 | neutral | None | None | None | None | I |
E/M | 0.6774 | likely_pathogenic | 0.6969 | pathogenic | 0.369 | Stabilizing | 0.176 | N | 0.279 | neutral | None | None | None | None | I |
E/N | 0.395 | ambiguous | 0.4281 | ambiguous | -0.563 | Destabilizing | 0.543 | D | 0.267 | neutral | None | None | None | None | I |
E/P | 0.974 | likely_pathogenic | 0.9825 | pathogenic | -0.145 | Destabilizing | 0.944 | D | 0.364 | neutral | None | None | None | None | I |
E/Q | 0.2153 | likely_benign | 0.2349 | benign | -0.462 | Destabilizing | 0.784 | D | 0.282 | neutral | N | 0.449348932 | None | None | I |
E/R | 0.5317 | ambiguous | 0.5692 | pathogenic | 0.244 | Stabilizing | 0.828 | D | 0.273 | neutral | None | None | None | None | I |
E/S | 0.3339 | likely_benign | 0.3702 | ambiguous | -0.759 | Destabilizing | 0.329 | N | 0.227 | neutral | None | None | None | None | I |
E/T | 0.4599 | ambiguous | 0.4953 | ambiguous | -0.505 | Destabilizing | 0.704 | D | 0.304 | neutral | None | None | None | None | I |
E/V | 0.474 | ambiguous | 0.4979 | ambiguous | -0.145 | Destabilizing | 0.27 | N | 0.331 | neutral | D | 0.540370925 | None | None | I |
E/W | 0.9748 | likely_pathogenic | 0.9817 | pathogenic | 0.012 | Stabilizing | 0.995 | D | 0.346 | neutral | None | None | None | None | I |
E/Y | 0.8185 | likely_pathogenic | 0.8496 | pathogenic | 0.015 | Stabilizing | 0.981 | D | 0.331 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.