Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5002 | 15229;15230;15231 | chr2:178734920;178734919;178734918 | chr2:179599647;179599646;179599645 |
N2AB | 4685 | 14278;14279;14280 | chr2:178734920;178734919;178734918 | chr2:179599647;179599646;179599645 |
N2A | 3758 | 11497;11498;11499 | chr2:178734920;178734919;178734918 | chr2:179599647;179599646;179599645 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/N | None | None | 0.425 | N | 0.334 | 0.172 | 0.260249123532 | gnomAD-4.0.0 | 1.59585E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78691E-05 | None | 0 | 0 | 0 | 0 | 0 |
H/P | None | None | 0.784 | N | 0.453 | 0.344 | 0.536988229258 | gnomAD-4.0.0 | 1.59534E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43571E-05 | 0 |
H/Y | None | None | 0.917 | N | 0.381 | 0.173 | 0.394230963961 | gnomAD-4.0.0 | 1.59585E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03214E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2501 | likely_benign | 0.3301 | benign | -0.469 | Destabilizing | 0.176 | N | 0.361 | neutral | None | None | None | None | N |
H/C | 0.1867 | likely_benign | 0.2241 | benign | 0.408 | Stabilizing | 0.981 | D | 0.504 | neutral | None | None | None | None | N |
H/D | 0.282 | likely_benign | 0.3575 | ambiguous | -0.331 | Destabilizing | 0.001 | N | 0.194 | neutral | N | 0.426463142 | None | None | N |
H/E | 0.2708 | likely_benign | 0.3482 | ambiguous | -0.243 | Destabilizing | 0.085 | N | 0.271 | neutral | None | None | None | None | N |
H/F | 0.2945 | likely_benign | 0.349 | ambiguous | 0.643 | Stabilizing | 0.981 | D | 0.535 | neutral | None | None | None | None | N |
H/G | 0.3017 | likely_benign | 0.3905 | ambiguous | -0.839 | Destabilizing | 0.3 | N | 0.393 | neutral | None | None | None | None | N |
H/I | 0.2635 | likely_benign | 0.3267 | benign | 0.542 | Stabilizing | 0.828 | D | 0.539 | neutral | None | None | None | None | N |
H/K | 0.2263 | likely_benign | 0.2561 | benign | -0.333 | Destabilizing | 0.176 | N | 0.362 | neutral | None | None | None | None | N |
H/L | 0.1044 | likely_benign | 0.131 | benign | 0.542 | Stabilizing | 0.425 | N | 0.431 | neutral | N | 0.480530439 | None | None | N |
H/M | 0.4781 | ambiguous | 0.5512 | ambiguous | 0.407 | Stabilizing | 0.944 | D | 0.503 | neutral | None | None | None | None | N |
H/N | 0.0996 | likely_benign | 0.1298 | benign | -0.301 | Destabilizing | 0.425 | N | 0.334 | neutral | N | 0.460008538 | None | None | N |
H/P | 0.2565 | likely_benign | 0.3256 | benign | 0.227 | Stabilizing | 0.784 | D | 0.453 | neutral | N | 0.453921508 | None | None | N |
H/Q | 0.1363 | likely_benign | 0.1665 | benign | -0.057 | Destabilizing | 0.003 | N | 0.119 | neutral | N | 0.423278262 | None | None | N |
H/R | 0.0822 | likely_benign | 0.0895 | benign | -1.001 | Destabilizing | 0.27 | N | 0.303 | neutral | N | 0.435680139 | None | None | N |
H/S | 0.1922 | likely_benign | 0.2475 | benign | -0.265 | Destabilizing | 0.037 | N | 0.199 | neutral | None | None | None | None | N |
H/T | 0.2398 | likely_benign | 0.3125 | benign | -0.075 | Destabilizing | 0.329 | N | 0.426 | neutral | None | None | None | None | N |
H/V | 0.2115 | likely_benign | 0.2649 | benign | 0.227 | Stabilizing | 0.665 | D | 0.455 | neutral | None | None | None | None | N |
H/W | 0.4076 | ambiguous | 0.4364 | ambiguous | 0.83 | Stabilizing | 0.995 | D | 0.501 | neutral | None | None | None | None | N |
H/Y | 0.1025 | likely_benign | 0.1182 | benign | 0.976 | Stabilizing | 0.917 | D | 0.381 | neutral | N | 0.476249143 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.