Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5004 | 15235;15236;15237 | chr2:178734914;178734913;178734912 | chr2:179599641;179599640;179599639 |
N2AB | 4687 | 14284;14285;14286 | chr2:178734914;178734913;178734912 | chr2:179599641;179599640;179599639 |
N2A | 3760 | 11503;11504;11505 | chr2:178734914;178734913;178734912 | chr2:179599641;179599640;179599639 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.027 | N | 0.434 | 0.202 | 0.278968121808 | gnomAD-4.0.0 | 1.59415E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86269E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6207 | likely_pathogenic | 0.6756 | pathogenic | -0.832 | Destabilizing | 0.035 | N | 0.479 | neutral | None | None | None | None | N |
K/C | 0.8406 | likely_pathogenic | 0.8443 | pathogenic | -0.929 | Destabilizing | 0.935 | D | 0.576 | neutral | None | None | None | None | N |
K/D | 0.8996 | likely_pathogenic | 0.9265 | pathogenic | -1.017 | Destabilizing | 0.149 | N | 0.485 | neutral | None | None | None | None | N |
K/E | 0.4319 | ambiguous | 0.4815 | ambiguous | -0.843 | Destabilizing | 0.027 | N | 0.434 | neutral | N | 0.503201079 | None | None | N |
K/F | 0.8908 | likely_pathogenic | 0.8956 | pathogenic | -0.249 | Destabilizing | 0.555 | D | 0.601 | neutral | None | None | None | None | N |
K/G | 0.7996 | likely_pathogenic | 0.8375 | pathogenic | -1.268 | Destabilizing | 0.149 | N | 0.547 | neutral | None | None | None | None | N |
K/H | 0.4064 | ambiguous | 0.4491 | ambiguous | -1.635 | Destabilizing | 0.555 | D | 0.582 | neutral | None | None | None | None | N |
K/I | 0.4589 | ambiguous | 0.4792 | ambiguous | 0.341 | Stabilizing | 0.38 | N | 0.603 | neutral | None | None | None | None | N |
K/L | 0.5291 | ambiguous | 0.5559 | ambiguous | 0.341 | Stabilizing | 0.149 | N | 0.543 | neutral | None | None | None | None | N |
K/M | 0.3786 | ambiguous | 0.3946 | ambiguous | 0.22 | Stabilizing | 0.741 | D | 0.583 | neutral | D | 0.56227475 | None | None | N |
K/N | 0.759 | likely_pathogenic | 0.7938 | pathogenic | -1.251 | Destabilizing | 0.117 | N | 0.42 | neutral | N | 0.510271479 | None | None | N |
K/P | 0.9487 | likely_pathogenic | 0.9703 | pathogenic | -0.022 | Destabilizing | 0.555 | D | 0.59 | neutral | None | None | None | None | N |
K/Q | 0.1809 | likely_benign | 0.198 | benign | -1.166 | Destabilizing | 0.117 | N | 0.48 | neutral | N | 0.51082682 | None | None | N |
K/R | 0.0891 | likely_benign | 0.0927 | benign | -1.166 | Destabilizing | None | N | 0.255 | neutral | N | 0.480940289 | None | None | N |
K/S | 0.6857 | likely_pathogenic | 0.7337 | pathogenic | -1.788 | Destabilizing | 0.003 | N | 0.132 | neutral | None | None | None | None | N |
K/T | 0.3109 | likely_benign | 0.3518 | ambiguous | -1.393 | Destabilizing | 0.001 | N | 0.237 | neutral | N | 0.50802636 | None | None | N |
K/V | 0.4338 | ambiguous | 0.4681 | ambiguous | -0.022 | Destabilizing | 0.149 | N | 0.543 | neutral | None | None | None | None | N |
K/W | 0.8693 | likely_pathogenic | 0.8739 | pathogenic | -0.242 | Destabilizing | 0.935 | D | 0.591 | neutral | None | None | None | None | N |
K/Y | 0.7922 | likely_pathogenic | 0.8014 | pathogenic | 0.07 | Stabilizing | 0.555 | D | 0.588 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.