Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5006 | 15241;15242;15243 | chr2:178734908;178734907;178734906 | chr2:179599635;179599634;179599633 |
N2AB | 4689 | 14290;14291;14292 | chr2:178734908;178734907;178734906 | chr2:179599635;179599634;179599633 |
N2A | 3762 | 11509;11510;11511 | chr2:178734908;178734907;178734906 | chr2:179599635;179599634;179599633 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.999 | N | 0.537 | 0.336 | 0.362361684037 | gnomAD-4.0.0 | 1.36915E-06 | None | None | None | None | I | None | 2.98829E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99753E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5894 | likely_pathogenic | 0.7048 | pathogenic | -0.088 | Destabilizing | 0.999 | D | 0.64 | neutral | None | None | None | None | I |
K/C | 0.8639 | likely_pathogenic | 0.9035 | pathogenic | -0.379 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
K/D | 0.8661 | likely_pathogenic | 0.9217 | pathogenic | 0.171 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
K/E | 0.4271 | ambiguous | 0.4088 | ambiguous | 0.199 | Stabilizing | 0.999 | D | 0.578 | neutral | N | 0.454264779 | None | None | I |
K/F | 0.9112 | likely_pathogenic | 0.9386 | pathogenic | -0.219 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | I |
K/G | 0.719 | likely_pathogenic | 0.8092 | pathogenic | -0.311 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | I |
K/H | 0.4484 | ambiguous | 0.5182 | ambiguous | -0.515 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
K/I | 0.613 | likely_pathogenic | 0.698 | pathogenic | 0.424 | Stabilizing | 1.0 | D | 0.696 | prob.neutral | N | 0.49237478 | None | None | I |
K/L | 0.5943 | likely_pathogenic | 0.6723 | pathogenic | 0.424 | Stabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | I |
K/M | 0.4243 | ambiguous | 0.5139 | ambiguous | 0.148 | Stabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | I |
K/N | 0.7061 | likely_pathogenic | 0.8016 | pathogenic | 0.047 | Stabilizing | 1.0 | D | 0.652 | neutral | N | 0.498946445 | None | None | I |
K/P | 0.9686 | likely_pathogenic | 0.9763 | pathogenic | 0.282 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
K/Q | 0.2104 | likely_benign | 0.2776 | benign | -0.088 | Destabilizing | 1.0 | D | 0.638 | neutral | N | 0.49069163 | None | None | I |
K/R | 0.0934 | likely_benign | 0.1015 | benign | -0.088 | Destabilizing | 0.999 | D | 0.537 | neutral | N | 0.48436784 | None | None | I |
K/S | 0.6059 | likely_pathogenic | 0.719 | pathogenic | -0.491 | Destabilizing | 0.999 | D | 0.616 | neutral | None | None | None | None | I |
K/T | 0.2906 | likely_benign | 0.3691 | ambiguous | -0.301 | Destabilizing | 1.0 | D | 0.656 | neutral | N | 0.400884572 | None | None | I |
K/V | 0.574 | likely_pathogenic | 0.6627 | pathogenic | 0.282 | Stabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | I |
K/W | 0.8668 | likely_pathogenic | 0.899 | pathogenic | -0.208 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | I |
K/Y | 0.8223 | likely_pathogenic | 0.8651 | pathogenic | 0.139 | Stabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.