Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC500815247;15248;15249 chr2:178734902;178734901;178734900chr2:179599629;179599628;179599627
N2AB469114296;14297;14298 chr2:178734902;178734901;178734900chr2:179599629;179599628;179599627
N2A376411515;11516;11517 chr2:178734902;178734901;178734900chr2:179599629;179599628;179599627
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: S
  • RefSeq wild type transcript codon: TCA
  • RefSeq wild type template codon: AGT
  • Domain: Ig-33
  • Domain position: 28
  • Structural Position: 41
  • Q(SASA): 0.4335
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
S/L None None 1.0 N 0.695 0.425 0.813890695137 gnomAD-4.0.0 2.40064E-06 None None None None I None 1.26695E-04 0 None 0 0 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
S/A 0.2059 likely_benign 0.1714 benign -0.085 Destabilizing 0.997 D 0.562 neutral D 0.529509179 None None I
S/C 0.3833 ambiguous 0.3204 benign -0.387 Destabilizing 1.0 D 0.755 deleterious None None None None I
S/D 0.7769 likely_pathogenic 0.7389 pathogenic 0.117 Stabilizing 0.999 D 0.715 prob.delet. None None None None I
S/E 0.8519 likely_pathogenic 0.8112 pathogenic 0.022 Stabilizing 0.999 D 0.703 prob.neutral None None None None I
S/F 0.324 likely_benign 0.2469 benign -0.789 Destabilizing 1.0 D 0.803 deleterious None None None None I
S/G 0.3219 likely_benign 0.3525 ambiguous -0.155 Destabilizing 0.999 D 0.559 neutral None None None None I
S/H 0.6295 likely_pathogenic 0.5564 ambiguous -0.473 Destabilizing 1.0 D 0.775 deleterious None None None None I
S/I 0.4018 ambiguous 0.3028 benign -0.036 Destabilizing 1.0 D 0.774 deleterious None None None None I
S/K 0.9297 likely_pathogenic 0.8985 pathogenic -0.371 Destabilizing 0.999 D 0.71 prob.delet. None None None None I
S/L 0.1934 likely_benign 0.16 benign -0.036 Destabilizing 1.0 D 0.695 prob.neutral N 0.512068058 None None I
S/M 0.3492 ambiguous 0.3176 benign -0.155 Destabilizing 1.0 D 0.775 deleterious None None None None I
S/N 0.3677 ambiguous 0.3102 benign -0.146 Destabilizing 0.999 D 0.695 prob.neutral None None None None I
S/P 0.9028 likely_pathogenic 0.9218 pathogenic -0.026 Destabilizing 1.0 D 0.741 deleterious D 0.672907569 None None I
S/Q 0.8057 likely_pathogenic 0.7577 pathogenic -0.333 Destabilizing 1.0 D 0.781 deleterious None None None None I
S/R 0.9112 likely_pathogenic 0.8696 pathogenic -0.135 Destabilizing 1.0 D 0.737 prob.delet. None None None None I
S/T 0.1133 likely_benign 0.126 benign -0.226 Destabilizing 0.999 D 0.551 neutral N 0.503766431 None None I
S/V 0.4062 ambiguous 0.3238 benign -0.026 Destabilizing 1.0 D 0.761 deleterious None None None None I
S/W 0.5636 ambiguous 0.5031 ambiguous -0.9 Destabilizing 1.0 D 0.791 deleterious None None None None I
S/Y 0.3164 likely_benign 0.2546 benign -0.562 Destabilizing 1.0 D 0.809 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.