Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5008 | 15247;15248;15249 | chr2:178734902;178734901;178734900 | chr2:179599629;179599628;179599627 |
N2AB | 4691 | 14296;14297;14298 | chr2:178734902;178734901;178734900 | chr2:179599629;179599628;179599627 |
N2A | 3764 | 11515;11516;11517 | chr2:178734902;178734901;178734900 | chr2:179599629;179599628;179599627 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 1.0 | N | 0.695 | 0.425 | 0.813890695137 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 1.26695E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2059 | likely_benign | 0.1714 | benign | -0.085 | Destabilizing | 0.997 | D | 0.562 | neutral | D | 0.529509179 | None | None | I |
S/C | 0.3833 | ambiguous | 0.3204 | benign | -0.387 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
S/D | 0.7769 | likely_pathogenic | 0.7389 | pathogenic | 0.117 | Stabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | I |
S/E | 0.8519 | likely_pathogenic | 0.8112 | pathogenic | 0.022 | Stabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | I |
S/F | 0.324 | likely_benign | 0.2469 | benign | -0.789 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
S/G | 0.3219 | likely_benign | 0.3525 | ambiguous | -0.155 | Destabilizing | 0.999 | D | 0.559 | neutral | None | None | None | None | I |
S/H | 0.6295 | likely_pathogenic | 0.5564 | ambiguous | -0.473 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
S/I | 0.4018 | ambiguous | 0.3028 | benign | -0.036 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | I |
S/K | 0.9297 | likely_pathogenic | 0.8985 | pathogenic | -0.371 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | I |
S/L | 0.1934 | likely_benign | 0.16 | benign | -0.036 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | N | 0.512068058 | None | None | I |
S/M | 0.3492 | ambiguous | 0.3176 | benign | -0.155 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
S/N | 0.3677 | ambiguous | 0.3102 | benign | -0.146 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | I |
S/P | 0.9028 | likely_pathogenic | 0.9218 | pathogenic | -0.026 | Destabilizing | 1.0 | D | 0.741 | deleterious | D | 0.672907569 | None | None | I |
S/Q | 0.8057 | likely_pathogenic | 0.7577 | pathogenic | -0.333 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
S/R | 0.9112 | likely_pathogenic | 0.8696 | pathogenic | -0.135 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
S/T | 0.1133 | likely_benign | 0.126 | benign | -0.226 | Destabilizing | 0.999 | D | 0.551 | neutral | N | 0.503766431 | None | None | I |
S/V | 0.4062 | ambiguous | 0.3238 | benign | -0.026 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
S/W | 0.5636 | ambiguous | 0.5031 | ambiguous | -0.9 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
S/Y | 0.3164 | likely_benign | 0.2546 | benign | -0.562 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.