Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5016 | 15271;15272;15273 | chr2:178734878;178734877;178734876 | chr2:179599605;179599604;179599603 |
N2AB | 4699 | 14320;14321;14322 | chr2:178734878;178734877;178734876 | chr2:179599605;179599604;179599603 |
N2A | 3772 | 11539;11540;11541 | chr2:178734878;178734877;178734876 | chr2:179599605;179599604;179599603 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs530321856 | -1.821 | 0.885 | N | 0.494 | 0.271 | 0.310147130316 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
F/L | rs530321856 | -1.821 | 0.885 | N | 0.494 | 0.271 | 0.310147130316 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
F/L | rs530321856 | -1.821 | 0.885 | N | 0.494 | 0.271 | 0.310147130316 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
F/L | rs530321856 | -1.821 | 0.885 | N | 0.494 | 0.271 | 0.310147130316 | gnomAD-4.0.0 | 3.04433E-06 | None | None | None | None | N | None | 1.74307E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.40984E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9532 | likely_pathogenic | 0.9551 | pathogenic | -2.556 | Highly Destabilizing | 0.953 | D | 0.637 | neutral | None | None | None | None | N |
F/C | 0.7628 | likely_pathogenic | 0.7576 | pathogenic | -1.381 | Destabilizing | 0.999 | D | 0.745 | deleterious | D | 0.622606548 | None | None | N |
F/D | 0.9839 | likely_pathogenic | 0.9781 | pathogenic | -1.677 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
F/E | 0.9688 | likely_pathogenic | 0.9645 | pathogenic | -1.594 | Destabilizing | 0.993 | D | 0.772 | deleterious | None | None | None | None | N |
F/G | 0.9607 | likely_pathogenic | 0.9607 | pathogenic | -2.894 | Highly Destabilizing | 0.993 | D | 0.731 | prob.delet. | None | None | None | None | N |
F/H | 0.6881 | likely_pathogenic | 0.687 | pathogenic | -1.135 | Destabilizing | 0.986 | D | 0.777 | deleterious | None | None | None | None | N |
F/I | 0.7355 | likely_pathogenic | 0.7501 | pathogenic | -1.521 | Destabilizing | 0.982 | D | 0.649 | neutral | N | 0.455013348 | None | None | N |
F/K | 0.928 | likely_pathogenic | 0.9108 | pathogenic | -1.269 | Destabilizing | 0.993 | D | 0.774 | deleterious | None | None | None | None | N |
F/L | 0.936 | likely_pathogenic | 0.9491 | pathogenic | -1.521 | Destabilizing | 0.885 | D | 0.494 | neutral | N | 0.449250938 | None | None | N |
F/M | 0.7878 | likely_pathogenic | 0.803 | pathogenic | -1.221 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
F/N | 0.8923 | likely_pathogenic | 0.8777 | pathogenic | -1.267 | Destabilizing | 0.998 | D | 0.788 | deleterious | None | None | None | None | N |
F/P | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -1.863 | Destabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | N |
F/Q | 0.887 | likely_pathogenic | 0.886 | pathogenic | -1.453 | Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
F/R | 0.8454 | likely_pathogenic | 0.8264 | pathogenic | -0.516 | Destabilizing | 0.993 | D | 0.785 | deleterious | None | None | None | None | N |
F/S | 0.8621 | likely_pathogenic | 0.8596 | pathogenic | -2.075 | Highly Destabilizing | 0.991 | D | 0.736 | prob.delet. | N | 0.459706502 | None | None | N |
F/T | 0.9186 | likely_pathogenic | 0.908 | pathogenic | -1.901 | Destabilizing | 0.993 | D | 0.741 | deleterious | None | None | None | None | N |
F/V | 0.7259 | likely_pathogenic | 0.7415 | pathogenic | -1.863 | Destabilizing | 0.939 | D | 0.621 | neutral | N | 0.469017388 | None | None | N |
F/W | 0.5641 | likely_pathogenic | 0.5604 | ambiguous | -0.59 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | None | None | None | None | N |
F/Y | 0.1201 | likely_benign | 0.1236 | benign | -0.794 | Destabilizing | 0.046 | N | 0.313 | neutral | N | 0.408102633 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.