Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5021 | 15286;15287;15288 | chr2:178734863;178734862;178734861 | chr2:179599590;179599589;179599588 |
N2AB | 4704 | 14335;14336;14337 | chr2:178734863;178734862;178734861 | chr2:179599590;179599589;179599588 |
N2A | 3777 | 11554;11555;11556 | chr2:178734863;178734862;178734861 | chr2:179599590;179599589;179599588 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs727503651 | -0.577 | 0.801 | N | 0.387 | 0.113 | 0.314417295294 | gnomAD-2.1.1 | 2.82E-05 | None | None | None | None | N | None | 0 | 2.03169E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs727503651 | -0.577 | 0.801 | N | 0.387 | 0.113 | 0.314417295294 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 2.41E-05 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs727503651 | -0.577 | 0.801 | N | 0.387 | 0.113 | 0.314417295294 | gnomAD-4.0.0 | 1.40938E-05 | None | None | None | None | N | None | 1.69113E-05 | 1.52604E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 2.84527E-05 |
E/K | rs779917005 | 0.218 | 0.012 | N | 0.244 | 0.198 | 0.346315397577 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1344 | likely_benign | 0.1256 | benign | -0.545 | Destabilizing | 0.012 | N | 0.193 | neutral | N | 0.508801056 | None | None | N |
E/C | 0.8883 | likely_pathogenic | 0.8807 | pathogenic | -0.342 | Destabilizing | 0.998 | D | 0.49 | neutral | None | None | None | None | N |
E/D | 0.3069 | likely_benign | 0.2939 | benign | -0.518 | Destabilizing | 0.801 | D | 0.387 | neutral | N | 0.505694657 | None | None | N |
E/F | 0.8023 | likely_pathogenic | 0.7971 | pathogenic | 0.023 | Stabilizing | 0.974 | D | 0.466 | neutral | None | None | None | None | N |
E/G | 0.2806 | likely_benign | 0.2537 | benign | -0.822 | Destabilizing | 0.669 | D | 0.403 | neutral | D | 0.549807926 | None | None | N |
E/H | 0.6298 | likely_pathogenic | 0.5906 | pathogenic | 0.286 | Stabilizing | 0.998 | D | 0.388 | neutral | None | None | None | None | N |
E/I | 0.2637 | likely_benign | 0.2646 | benign | 0.184 | Stabilizing | 0.904 | D | 0.44 | neutral | None | None | None | None | N |
E/K | 0.1959 | likely_benign | 0.1489 | benign | 0.122 | Stabilizing | 0.012 | N | 0.244 | neutral | N | 0.506468355 | None | None | N |
E/L | 0.3218 | likely_benign | 0.3031 | benign | 0.184 | Stabilizing | 0.728 | D | 0.424 | neutral | None | None | None | None | N |
E/M | 0.3761 | ambiguous | 0.3678 | ambiguous | 0.222 | Stabilizing | 0.993 | D | 0.446 | neutral | None | None | None | None | N |
E/N | 0.4424 | ambiguous | 0.4217 | ambiguous | -0.503 | Destabilizing | 0.949 | D | 0.393 | neutral | None | None | None | None | N |
E/P | 0.2958 | likely_benign | 0.2707 | benign | -0.038 | Destabilizing | 0.016 | N | 0.206 | neutral | None | None | None | None | N |
E/Q | 0.1489 | likely_benign | 0.13 | benign | -0.399 | Destabilizing | 0.934 | D | 0.41 | neutral | N | 0.50893731 | None | None | N |
E/R | 0.356 | ambiguous | 0.28 | benign | 0.511 | Stabilizing | 0.904 | D | 0.376 | neutral | None | None | None | None | N |
E/S | 0.3216 | likely_benign | 0.3096 | benign | -0.68 | Destabilizing | 0.728 | D | 0.361 | neutral | None | None | None | None | N |
E/T | 0.2871 | likely_benign | 0.2781 | benign | -0.437 | Destabilizing | 0.842 | D | 0.387 | neutral | None | None | None | None | N |
E/V | 0.1507 | likely_benign | 0.146 | benign | -0.038 | Destabilizing | 0.051 | N | 0.253 | neutral | N | 0.510474712 | None | None | N |
E/W | 0.9453 | likely_pathogenic | 0.9431 | pathogenic | 0.322 | Stabilizing | 0.998 | D | 0.585 | neutral | None | None | None | None | N |
E/Y | 0.6934 | likely_pathogenic | 0.6934 | pathogenic | 0.307 | Stabilizing | 0.991 | D | 0.459 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.