Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5022 | 15289;15290;15291 | chr2:178734860;178734859;178734858 | chr2:179599587;179599586;179599585 |
N2AB | 4705 | 14338;14339;14340 | chr2:178734860;178734859;178734858 | chr2:179599587;179599586;179599585 |
N2A | 3778 | 11557;11558;11559 | chr2:178734860;178734859;178734858 | chr2:179599587;179599586;179599585 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs931153562 | None | 0.982 | D | 0.692 | 0.553 | 0.642232531769 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/F | rs931153562 | None | 0.982 | D | 0.692 | 0.553 | 0.642232531769 | gnomAD-4.0.0 | 6.57212E-06 | None | None | None | None | N | None | 2.41278E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/V | rs931153562 | -1.409 | 0.17 | N | 0.372 | 0.193 | 0.363356657567 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/V | rs931153562 | -1.409 | 0.17 | N | 0.372 | 0.193 | 0.363356657567 | gnomAD-4.0.0 | 1.5916E-06 | None | None | None | None | N | None | 5.65611E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7287 | likely_pathogenic | 0.738 | pathogenic | -2.09 | Highly Destabilizing | 0.953 | D | 0.467 | neutral | None | None | None | None | N |
L/C | 0.8021 | likely_pathogenic | 0.8158 | pathogenic | -1.254 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
L/D | 0.9833 | likely_pathogenic | 0.9818 | pathogenic | -1.925 | Destabilizing | 0.998 | D | 0.833 | deleterious | None | None | None | None | N |
L/E | 0.9002 | likely_pathogenic | 0.9015 | pathogenic | -1.737 | Destabilizing | 0.998 | D | 0.82 | deleterious | None | None | None | None | N |
L/F | 0.3117 | likely_benign | 0.2932 | benign | -1.196 | Destabilizing | 0.982 | D | 0.692 | prob.neutral | D | 0.61317489 | None | None | N |
L/G | 0.9376 | likely_pathogenic | 0.9409 | pathogenic | -2.575 | Highly Destabilizing | 0.998 | D | 0.808 | deleterious | None | None | None | None | N |
L/H | 0.816 | likely_pathogenic | 0.8023 | pathogenic | -1.74 | Destabilizing | 0.999 | D | 0.819 | deleterious | D | 0.705510991 | None | None | N |
L/I | 0.07 | likely_benign | 0.0676 | benign | -0.723 | Destabilizing | 0.046 | N | 0.389 | neutral | N | 0.448330142 | None | None | N |
L/K | 0.8502 | likely_pathogenic | 0.8432 | pathogenic | -1.493 | Destabilizing | 0.993 | D | 0.763 | deleterious | None | None | None | None | N |
L/M | 0.1785 | likely_benign | 0.1829 | benign | -0.621 | Destabilizing | 0.986 | D | 0.723 | prob.delet. | None | None | None | None | N |
L/N | 0.9192 | likely_pathogenic | 0.9169 | pathogenic | -1.729 | Destabilizing | 0.998 | D | 0.83 | deleterious | None | None | None | None | N |
L/P | 0.9396 | likely_pathogenic | 0.9253 | pathogenic | -1.156 | Destabilizing | 0.997 | D | 0.831 | deleterious | D | 0.653996328 | None | None | N |
L/Q | 0.7167 | likely_pathogenic | 0.7118 | pathogenic | -1.648 | Destabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | N |
L/R | 0.7801 | likely_pathogenic | 0.7675 | pathogenic | -1.169 | Destabilizing | 0.997 | D | 0.797 | deleterious | D | 0.666555392 | None | None | N |
L/S | 0.8969 | likely_pathogenic | 0.8972 | pathogenic | -2.429 | Highly Destabilizing | 0.993 | D | 0.741 | deleterious | None | None | None | None | N |
L/T | 0.7313 | likely_pathogenic | 0.7417 | pathogenic | -2.093 | Highly Destabilizing | 0.986 | D | 0.675 | prob.neutral | None | None | None | None | N |
L/V | 0.1041 | likely_benign | 0.1017 | benign | -1.156 | Destabilizing | 0.17 | N | 0.372 | neutral | N | 0.520507819 | None | None | N |
L/W | 0.6502 | likely_pathogenic | 0.6371 | pathogenic | -1.442 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
L/Y | 0.7181 | likely_pathogenic | 0.7238 | pathogenic | -1.142 | Destabilizing | 0.998 | D | 0.771 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.