Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5023 | 15292;15293;15294 | chr2:178734857;178734856;178734855 | chr2:179599584;179599583;179599582 |
N2AB | 4706 | 14341;14342;14343 | chr2:178734857;178734856;178734855 | chr2:179599584;179599583;179599582 |
N2A | 3779 | 11560;11561;11562 | chr2:178734857;178734856;178734855 | chr2:179599584;179599583;179599582 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs878907513 | 0.065 | None | N | 0.125 | 0.134 | None | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
S/N | rs878907513 | 0.065 | None | N | 0.125 | 0.134 | None | gnomAD-4.0.0 | 1.98436E-05 | None | None | None | None | N | None | 2.98793E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.42863E-05 | 0 | 1.65673E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0712 | likely_benign | 0.0655 | benign | -0.08 | Destabilizing | 0.007 | N | 0.16 | neutral | None | None | None | None | N |
S/C | 0.0854 | likely_benign | 0.0852 | benign | -0.316 | Destabilizing | 0.612 | D | 0.337 | neutral | D | 0.574558587 | None | None | N |
S/D | 0.1912 | likely_benign | 0.1529 | benign | 0.14 | Stabilizing | 0.016 | N | 0.173 | neutral | None | None | None | None | N |
S/E | 0.2402 | likely_benign | 0.1904 | benign | 0.041 | Stabilizing | 0.016 | N | 0.187 | neutral | None | None | None | None | N |
S/F | 0.1358 | likely_benign | 0.1227 | benign | -0.802 | Destabilizing | 0.214 | N | 0.396 | neutral | None | None | None | None | N |
S/G | 0.0717 | likely_benign | 0.0714 | benign | -0.143 | Destabilizing | 0.012 | N | 0.174 | neutral | N | 0.497861686 | None | None | N |
S/H | 0.1322 | likely_benign | 0.104 | benign | -0.484 | Destabilizing | 0.001 | N | 0.224 | neutral | None | None | None | None | N |
S/I | 0.0932 | likely_benign | 0.0815 | benign | -0.05 | Destabilizing | 0.029 | N | 0.416 | neutral | N | 0.513252542 | None | None | N |
S/K | 0.2215 | likely_benign | 0.1596 | benign | -0.317 | Destabilizing | 0.001 | N | 0.181 | neutral | None | None | None | None | N |
S/L | 0.0779 | likely_benign | 0.0737 | benign | -0.05 | Destabilizing | None | N | 0.241 | neutral | None | None | None | None | N |
S/M | 0.1343 | likely_benign | 0.1206 | benign | -0.113 | Destabilizing | 0.214 | N | 0.342 | neutral | None | None | None | None | N |
S/N | 0.0707 | likely_benign | 0.0653 | benign | -0.059 | Destabilizing | None | N | 0.125 | neutral | N | 0.496170762 | None | None | N |
S/P | 0.13 | likely_benign | 0.1042 | benign | -0.034 | Destabilizing | 0.136 | N | 0.382 | neutral | None | None | None | None | N |
S/Q | 0.1986 | likely_benign | 0.1528 | benign | -0.26 | Destabilizing | 0.001 | N | 0.165 | neutral | None | None | None | None | N |
S/R | 0.1774 | likely_benign | 0.1284 | benign | -0.094 | Destabilizing | None | N | 0.257 | neutral | N | 0.469923524 | None | None | N |
S/T | 0.0606 | likely_benign | 0.0578 | benign | -0.154 | Destabilizing | None | N | 0.17 | neutral | N | 0.45064483 | None | None | N |
S/V | 0.1123 | likely_benign | 0.094 | benign | -0.034 | Destabilizing | 0.038 | N | 0.363 | neutral | None | None | None | None | N |
S/W | 0.2004 | likely_benign | 0.1928 | benign | -0.907 | Destabilizing | 0.864 | D | 0.377 | neutral | None | None | None | None | N |
S/Y | 0.1142 | likely_benign | 0.1016 | benign | -0.57 | Destabilizing | 0.214 | N | 0.407 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.