Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5030 | 15313;15314;15315 | chr2:178734836;178734835;178734834 | chr2:179599563;179599562;179599561 |
N2AB | 4713 | 14362;14363;14364 | chr2:178734836;178734835;178734834 | chr2:179599563;179599562;179599561 |
N2A | 3786 | 11581;11582;11583 | chr2:178734836;178734835;178734834 | chr2:179599563;179599562;179599561 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs753772585 | -0.734 | None | N | 0.065 | 0.098 | 0.363158594168 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
M/I | rs753772585 | -0.734 | None | N | 0.065 | 0.098 | 0.363158594168 | gnomAD-4.0.0 | 8.1197E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.63939E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.5259 | ambiguous | 0.5088 | ambiguous | -2.507 | Highly Destabilizing | 0.048 | N | 0.323 | neutral | None | None | None | None | N |
M/C | 0.8488 | likely_pathogenic | 0.847 | pathogenic | -1.775 | Destabilizing | 0.859 | D | 0.517 | neutral | None | None | None | None | N |
M/D | 0.9317 | likely_pathogenic | 0.9181 | pathogenic | -1.497 | Destabilizing | 0.364 | N | 0.561 | neutral | None | None | None | None | N |
M/E | 0.6841 | likely_pathogenic | 0.6353 | pathogenic | -1.326 | Destabilizing | 0.364 | N | 0.485 | neutral | None | None | None | None | N |
M/F | 0.3801 | ambiguous | 0.3442 | ambiguous | -0.986 | Destabilizing | 0.22 | N | 0.374 | neutral | None | None | None | None | N |
M/G | 0.7524 | likely_pathogenic | 0.7323 | pathogenic | -2.947 | Highly Destabilizing | 0.364 | N | 0.474 | neutral | None | None | None | None | N |
M/H | 0.6559 | likely_pathogenic | 0.6242 | pathogenic | -2.139 | Highly Destabilizing | 0.859 | D | 0.534 | neutral | None | None | None | None | N |
M/I | 0.3278 | likely_benign | 0.31 | benign | -1.262 | Destabilizing | None | N | 0.065 | neutral | N | 0.461491456 | None | None | N |
M/K | 0.2614 | likely_benign | 0.2319 | benign | -1.358 | Destabilizing | 0.301 | N | 0.414 | neutral | D | 0.541983132 | None | None | N |
M/L | 0.1915 | likely_benign | 0.1851 | benign | -1.262 | Destabilizing | None | N | 0.059 | neutral | N | 0.483209648 | None | None | N |
M/N | 0.6346 | likely_pathogenic | 0.6181 | pathogenic | -1.474 | Destabilizing | 0.364 | N | 0.541 | neutral | None | None | None | None | N |
M/P | 0.9124 | likely_pathogenic | 0.8711 | pathogenic | -1.658 | Destabilizing | 0.635 | D | 0.575 | neutral | None | None | None | None | N |
M/Q | 0.344 | ambiguous | 0.3213 | benign | -1.316 | Destabilizing | 0.635 | D | 0.464 | neutral | None | None | None | None | N |
M/R | 0.2813 | likely_benign | 0.2495 | benign | -1.146 | Destabilizing | 0.301 | N | 0.528 | neutral | N | 0.505338044 | None | None | N |
M/S | 0.5171 | ambiguous | 0.4936 | ambiguous | -2.136 | Highly Destabilizing | 0.055 | N | 0.366 | neutral | None | None | None | None | N |
M/T | 0.3137 | likely_benign | 0.3088 | benign | -1.844 | Destabilizing | 0.001 | N | 0.229 | neutral | N | 0.512313459 | None | None | N |
M/V | 0.144 | likely_benign | 0.1312 | benign | -1.658 | Destabilizing | 0.003 | N | 0.251 | neutral | N | 0.492143638 | None | None | N |
M/W | 0.7136 | likely_pathogenic | 0.6475 | pathogenic | -1.093 | Destabilizing | 0.958 | D | 0.499 | neutral | None | None | None | None | N |
M/Y | 0.6393 | likely_pathogenic | 0.5784 | pathogenic | -1.172 | Destabilizing | 0.667 | D | 0.568 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.