Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5033 | 15322;15323;15324 | chr2:178734827;178734826;178734825 | chr2:179599554;179599553;179599552 |
N2AB | 4716 | 14371;14372;14373 | chr2:178734827;178734826;178734825 | chr2:179599554;179599553;179599552 |
N2A | 3789 | 11590;11591;11592 | chr2:178734827;178734826;178734825 | chr2:179599554;179599553;179599552 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1296327328 | None | 0.027 | N | 0.213 | 0.084 | 0.513787655203 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.099 | likely_benign | 0.114 | benign | -0.579 | Destabilizing | None | N | 0.077 | neutral | N | 0.510046488 | None | None | I |
V/C | 0.5686 | likely_pathogenic | 0.5882 | pathogenic | -0.712 | Destabilizing | 0.824 | D | 0.261 | neutral | None | None | None | None | I |
V/D | 0.15 | likely_benign | 0.159 | benign | -0.085 | Destabilizing | 0.117 | N | 0.374 | neutral | N | 0.467020121 | None | None | I |
V/E | 0.1356 | likely_benign | 0.1527 | benign | -0.155 | Destabilizing | 0.149 | N | 0.324 | neutral | None | None | None | None | I |
V/F | 0.1251 | likely_benign | 0.1371 | benign | -0.555 | Destabilizing | 0.484 | N | 0.277 | neutral | N | 0.511373087 | None | None | I |
V/G | 0.1406 | likely_benign | 0.1498 | benign | -0.76 | Destabilizing | 0.062 | N | 0.333 | neutral | N | 0.507282568 | None | None | I |
V/H | 0.2867 | likely_benign | 0.3143 | benign | -0.18 | Destabilizing | 0.935 | D | 0.309 | neutral | None | None | None | None | I |
V/I | 0.0704 | likely_benign | 0.0745 | benign | -0.234 | Destabilizing | 0.027 | N | 0.213 | neutral | N | 0.492435847 | None | None | I |
V/K | 0.1922 | likely_benign | 0.1975 | benign | -0.492 | Destabilizing | 0.001 | N | 0.165 | neutral | None | None | None | None | I |
V/L | 0.1263 | likely_benign | 0.1426 | benign | -0.234 | Destabilizing | 0.027 | N | 0.249 | neutral | N | 0.495592617 | None | None | I |
V/M | 0.1097 | likely_benign | 0.1234 | benign | -0.431 | Destabilizing | 0.555 | D | 0.242 | neutral | None | None | None | None | I |
V/N | 0.1131 | likely_benign | 0.1256 | benign | -0.313 | Destabilizing | 0.38 | N | 0.373 | neutral | None | None | None | None | I |
V/P | 0.5861 | likely_pathogenic | 0.6427 | pathogenic | -0.313 | Destabilizing | 0.38 | N | 0.349 | neutral | None | None | None | None | I |
V/Q | 0.1586 | likely_benign | 0.1716 | benign | -0.478 | Destabilizing | 0.38 | N | 0.345 | neutral | None | None | None | None | I |
V/R | 0.1774 | likely_benign | 0.1801 | benign | -0.021 | Destabilizing | 0.081 | N | 0.351 | neutral | None | None | None | None | I |
V/S | 0.1005 | likely_benign | 0.1086 | benign | -0.757 | Destabilizing | 0.035 | N | 0.271 | neutral | None | None | None | None | I |
V/T | 0.1109 | likely_benign | 0.1257 | benign | -0.715 | Destabilizing | 0.001 | N | 0.146 | neutral | None | None | None | None | I |
V/W | 0.6255 | likely_pathogenic | 0.6712 | pathogenic | -0.649 | Destabilizing | 0.935 | D | 0.344 | neutral | None | None | None | None | I |
V/Y | 0.3287 | likely_benign | 0.3614 | ambiguous | -0.36 | Destabilizing | 0.555 | D | 0.275 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.