Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5034 | 15325;15326;15327 | chr2:178734824;178734823;178734822 | chr2:179599551;179599550;179599549 |
N2AB | 4717 | 14374;14375;14376 | chr2:178734824;178734823;178734822 | chr2:179599551;179599550;179599549 |
N2A | 3790 | 11593;11594;11595 | chr2:178734824;178734823;178734822 | chr2:179599551;179599550;179599549 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | rs1211030254 | None | 0.001 | N | 0.234 | 0.126 | 0.104622674875 | gnomAD-4.0.0 | 1.27304E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.21939E-04 | None | 0 | 0 | 0 | 0 | 0 |
N/S | rs764009823 | 0.112 | 0.005 | N | 0.193 | 0.077 | 0.115124310173 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 1.65893E-04 |
N/S | rs764009823 | 0.112 | 0.005 | N | 0.193 | 0.077 | 0.115124310173 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/S | rs764009823 | 0.112 | 0.005 | N | 0.193 | 0.077 | 0.115124310173 | gnomAD-4.0.0 | 6.8166E-06 | None | None | None | None | I | None | 2.66951E-05 | 3.33411E-05 | None | 0 | 0 | None | 0 | 0 | 4.23804E-06 | 1.09803E-05 | 1.60102E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3422 | ambiguous | 0.2902 | benign | -0.095 | Destabilizing | 0.035 | N | 0.366 | neutral | None | None | None | None | I |
N/C | 0.5604 | ambiguous | 0.4795 | ambiguous | 0.047 | Stabilizing | 0.935 | D | 0.379 | neutral | None | None | None | None | I |
N/D | 0.1076 | likely_benign | 0.1012 | benign | 0.106 | Stabilizing | 0.117 | N | 0.312 | neutral | N | 0.413511425 | None | None | I |
N/E | 0.4614 | ambiguous | 0.3871 | ambiguous | 0.042 | Stabilizing | 0.081 | N | 0.283 | neutral | None | None | None | None | I |
N/F | 0.7702 | likely_pathogenic | 0.7168 | pathogenic | -0.72 | Destabilizing | 0.38 | N | 0.347 | neutral | None | None | None | None | I |
N/G | 0.2676 | likely_benign | 0.2407 | benign | -0.174 | Destabilizing | 0.149 | N | 0.292 | neutral | None | None | None | None | I |
N/H | 0.143 | likely_benign | 0.1273 | benign | -0.161 | Destabilizing | 0.001 | N | 0.234 | neutral | N | 0.440913618 | None | None | I |
N/I | 0.615 | likely_pathogenic | 0.5399 | ambiguous | 0.012 | Stabilizing | 0.317 | N | 0.363 | neutral | N | 0.498322353 | None | None | I |
N/K | 0.4204 | ambiguous | 0.3238 | benign | 0.099 | Stabilizing | None | N | 0.203 | neutral | N | 0.43629383 | None | None | I |
N/L | 0.4986 | ambiguous | 0.4335 | ambiguous | 0.012 | Stabilizing | 0.149 | N | 0.399 | neutral | None | None | None | None | I |
N/M | 0.6107 | likely_pathogenic | 0.5416 | ambiguous | 0.038 | Stabilizing | 0.935 | D | 0.322 | neutral | None | None | None | None | I |
N/P | 0.697 | likely_pathogenic | 0.6799 | pathogenic | -0.002 | Destabilizing | 0.555 | D | 0.352 | neutral | None | None | None | None | I |
N/Q | 0.4056 | ambiguous | 0.3401 | ambiguous | -0.338 | Destabilizing | 0.235 | N | 0.272 | neutral | None | None | None | None | I |
N/R | 0.4662 | ambiguous | 0.3779 | ambiguous | 0.17 | Stabilizing | 0.081 | N | 0.29 | neutral | None | None | None | None | I |
N/S | 0.0996 | likely_benign | 0.093 | benign | -0.116 | Destabilizing | 0.005 | N | 0.193 | neutral | N | 0.446998603 | None | None | I |
N/T | 0.2872 | likely_benign | 0.2447 | benign | -0.069 | Destabilizing | 0.002 | N | 0.221 | neutral | N | 0.449306925 | None | None | I |
N/V | 0.6126 | likely_pathogenic | 0.5318 | ambiguous | -0.002 | Destabilizing | 0.38 | N | 0.391 | neutral | None | None | None | None | I |
N/W | 0.8923 | likely_pathogenic | 0.8616 | pathogenic | -0.863 | Destabilizing | 0.935 | D | 0.475 | neutral | None | None | None | None | I |
N/Y | 0.3023 | likely_benign | 0.2514 | benign | -0.531 | Destabilizing | 0.188 | N | 0.336 | neutral | N | 0.498322353 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.