Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5037 | 15334;15335;15336 | chr2:178734815;178734814;178734813 | chr2:179599542;179599541;179599540 |
N2AB | 4720 | 14383;14384;14385 | chr2:178734815;178734814;178734813 | chr2:179599542;179599541;179599540 |
N2A | 3793 | 11602;11603;11604 | chr2:178734815;178734814;178734813 | chr2:179599542;179599541;179599540 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs2081160946 | None | 1.0 | N | 0.634 | 0.364 | 0.363944505237 | gnomAD-4.0.0 | 1.32035E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.44375E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8672 | likely_pathogenic | 0.8047 | pathogenic | -0.858 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
A/D | 0.9847 | likely_pathogenic | 0.985 | pathogenic | -2.499 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | N | 0.50280466 | None | None | N |
A/E | 0.9775 | likely_pathogenic | 0.9737 | pathogenic | -2.257 | Highly Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
A/F | 0.8728 | likely_pathogenic | 0.8807 | pathogenic | -0.687 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
A/G | 0.3024 | likely_benign | 0.3062 | benign | -1.663 | Destabilizing | 1.0 | D | 0.598 | neutral | N | 0.452563784 | None | None | N |
A/H | 0.9864 | likely_pathogenic | 0.9838 | pathogenic | -2.205 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
A/I | 0.7561 | likely_pathogenic | 0.7357 | pathogenic | 0.182 | Stabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
A/K | 0.9945 | likely_pathogenic | 0.993 | pathogenic | -1.127 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
A/L | 0.6852 | likely_pathogenic | 0.6413 | pathogenic | 0.182 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
A/M | 0.6956 | likely_pathogenic | 0.687 | pathogenic | 0.031 | Stabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
A/N | 0.9577 | likely_pathogenic | 0.9514 | pathogenic | -1.518 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
A/P | 0.9849 | likely_pathogenic | 0.9741 | pathogenic | -0.233 | Destabilizing | 1.0 | D | 0.824 | deleterious | N | 0.466561099 | None | None | N |
A/Q | 0.9739 | likely_pathogenic | 0.9678 | pathogenic | -1.242 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
A/R | 0.986 | likely_pathogenic | 0.9827 | pathogenic | -1.342 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
A/S | 0.389 | ambiguous | 0.3565 | ambiguous | -1.872 | Destabilizing | 1.0 | D | 0.603 | neutral | N | 0.446961528 | None | None | N |
A/T | 0.5215 | ambiguous | 0.4501 | ambiguous | -1.514 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | N | 0.438753715 | None | None | N |
A/V | 0.4292 | ambiguous | 0.4016 | ambiguous | -0.233 | Destabilizing | 1.0 | D | 0.634 | neutral | N | 0.432959001 | None | None | N |
A/W | 0.9905 | likely_pathogenic | 0.9898 | pathogenic | -1.58 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
A/Y | 0.9454 | likely_pathogenic | 0.9468 | pathogenic | -1.025 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.