Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5039 | 15340;15341;15342 | chr2:178734809;178734808;178734807 | chr2:179599536;179599535;179599534 |
N2AB | 4722 | 14389;14390;14391 | chr2:178734809;178734808;178734807 | chr2:179599536;179599535;179599534 |
N2A | 3795 | 11608;11609;11610 | chr2:178734809;178734808;178734807 | chr2:179599536;179599535;179599534 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs917573806 | None | 1.0 | D | 0.821 | 0.544 | 0.710613719351 | gnomAD-4.0.0 | 1.5913E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8584E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8968 | likely_pathogenic | 0.8658 | pathogenic | -2.603 | Highly Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
L/C | 0.8865 | likely_pathogenic | 0.8689 | pathogenic | -1.838 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -3.393 | Highly Destabilizing | 1.0 | D | 0.937 | deleterious | None | None | None | None | N |
L/E | 0.9972 | likely_pathogenic | 0.9962 | pathogenic | -3.083 | Highly Destabilizing | 1.0 | D | 0.923 | deleterious | None | None | None | None | N |
L/F | 0.5288 | ambiguous | 0.5601 | ambiguous | -1.647 | Destabilizing | 1.0 | D | 0.821 | deleterious | D | 0.672947575 | None | None | N |
L/G | 0.9891 | likely_pathogenic | 0.9869 | pathogenic | -3.204 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
L/H | 0.9905 | likely_pathogenic | 0.988 | pathogenic | -2.866 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | D | 0.783709528 | None | None | N |
L/I | 0.2011 | likely_benign | 0.1855 | benign | -0.81 | Destabilizing | 0.999 | D | 0.62 | neutral | D | 0.621051523 | None | None | N |
L/K | 0.9953 | likely_pathogenic | 0.9934 | pathogenic | -2.084 | Highly Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
L/M | 0.2635 | likely_benign | 0.2519 | benign | -0.845 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
L/N | 0.9982 | likely_pathogenic | 0.9975 | pathogenic | -2.771 | Highly Destabilizing | 1.0 | D | 0.938 | deleterious | None | None | None | None | N |
L/P | 0.9982 | likely_pathogenic | 0.9979 | pathogenic | -1.397 | Destabilizing | 1.0 | D | 0.938 | deleterious | D | 0.817506589 | None | None | N |
L/Q | 0.9825 | likely_pathogenic | 0.9756 | pathogenic | -2.461 | Highly Destabilizing | 1.0 | D | 0.945 | deleterious | None | None | None | None | N |
L/R | 0.9852 | likely_pathogenic | 0.9807 | pathogenic | -2.078 | Highly Destabilizing | 1.0 | D | 0.939 | deleterious | D | 0.817506589 | None | None | N |
L/S | 0.9904 | likely_pathogenic | 0.9868 | pathogenic | -3.352 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
L/T | 0.9579 | likely_pathogenic | 0.9453 | pathogenic | -2.874 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
L/V | 0.2466 | likely_benign | 0.2068 | benign | -1.397 | Destabilizing | 0.999 | D | 0.626 | neutral | D | 0.660739791 | None | None | N |
L/W | 0.9363 | likely_pathogenic | 0.9378 | pathogenic | -2.092 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/Y | 0.964 | likely_pathogenic | 0.9648 | pathogenic | -1.799 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.